| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4118 |
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| Symbol | rhtB |
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| ID | 7388911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3473979 |
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| End bp | 3474620 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643652819 |
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| Product | RhtB family transporter |
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| Protein accession | YP_002550992 |
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| Protein GI | 222150035 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCCCT ATCTGTTTGA ACTCGCATCC CTGATGGCTA TTTTCGCCTT CGCTATCGTC
TCTCCCGGTG CTGATCTGGC TATGGTCATG CGCCAATCCC TGGTACATGG ACGGCGTGAG
GCGATCATCA CCAGTTTCGG TGTTGGTTCG TCGCTGATGT TTCATGTGAC CTACACCATT
CTCGGCCTTG GCCTGATCAT TTCCCAGTCG ATCTACCTGT TCAATATCGT CAAATGGTGT
GGTGTCGCCT ATCTGCTTTA CATCGGCGTA AAGTCTTTGC GGGCGGGTAA ATCCGATATG
ACGGCGCAGC CGACTGTGGA GGCGGGCGAT CAAAAACGCC AGTCGATCTC CAAGTCCTTC
TTTCTCGGTT TTGCAGCCAA TGCCCTCAAT CCGAAACCGG TGTTTTTCTT CCTGTCGATC
TTCTCCACGG TGGTCAGCAT TCACACGCCG ATCGCGGTTA AGTTCGGGTA TGGCCTAGTG
ATGGCGACCT GCCTGATCAC CTGGTTTGTC GGCGTCAGTA TTTTCATGAC GACGCCGAAA
ATGCGTGCGG CCTTTTCACG CGCCAGCCAA TGGATCGACC GCATCAGCGG TGCAGTCTTC
ATTGTGCTTG GTTTGAAGCT TGCGACGGAA AAGGCCAGTT AA
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| Protein sequence | MHPYLFELAS LMAIFAFAIV SPGADLAMVM RQSLVHGRRE AIITSFGVGS SLMFHVTYTI
LGLGLIISQS IYLFNIVKWC GVAYLLYIGV KSLRAGKSDM TAQPTVEAGD QKRQSISKSF
FLGFAANALN PKPVFFFLSI FSTVVSIHTP IAVKFGYGLV MATCLITWFV GVSIFMTTPK
MRAAFSRASQ WIDRISGAVF IVLGLKLATE KAS
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