Gene Avi_4110 details

Gene Information

• Locus tag: Avi_4110
• Symbol: atpH
• ID: 7388904
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 3463746
• End bp: 3464327
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643652812
• Product: F0F1 ATP synthase subunit delta
• Protein accession: YP_002550985
• Protein GI: 222150028
• COG category: [C] Energy production and conversion
• COG ID: [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)
• TIGRFAM ID: [TIGR01145] ATP synthase, F1 delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCCGTGG CAGACACATC CCAGCCTATG TCCGGTCAGC CGGTTTCCGC AGTTGCAGAG 
CGCTATGCGT CGTCGCTTTT CGAGCTGGCG CGCGAGGCGG GTTCTGTGGA TGCGGTGGCT 
GGCGATCTCA ATCGTTTCCA GGCGATGATC GACGAGAGCG TTGATCTGCA GCGGCTGGTT 
ACCAGCCCGG CCTTCACCAG CGAGCAGCAG GCTTCTGCCA TCGCAGCTCT GTGTGACAAG 
GCTGAAATTG GCGGCCTCGT CGGCAATTTC CTGAAGCTCG TTGCAGCCAA TCGTCGCCTG 
TTTGCCGTTC CCGGCATGAT CGCAGCCTTC CGCATGATCG CGGCGCGCCA CCGTGGCGAA 
CTGGCTGCTG ATGTGACCTC TGCTCATGCG CTGACCCCGG CGCAGGAAAC CGAACTGAAG 
GAGGCGCTGA AGAGCGCGAC CGGAAAGACC GTTACGATGT TCGTGACTGT CGATCCGTCT 
CTCCTGGGTG GTCTGATCGT CAAGATCGGC TCCCGTCAGA TAGACACGTC TCTTCGCACC 
AAACTTTCCA CCCTTAAGCT TGCACTGAAA GAGGTTGGCT GA 

 

Protein sequence

MPVADTSQPM SGQPVSAVAE RYASSLFELA REAGSVDAVA GDLNRFQAMI DESVDLQRLV 
TSPAFTSEQQ ASAIAALCDK AEIGGLVGNF LKLVAANRRL FAVPGMIAAF RMIAARHRGE 
LAADVTSAHA LTPAQETELK EALKSATGKT VTMFVTVDPS LLGGLIVKIG SRQIDTSLRT 
KLSTLKLALK EVG