| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4108 |
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| Symbol | atpA |
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| ID | 7388903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3462220 |
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| End bp | 3463746 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643652811 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_002550984 |
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| Protein GI | 222150027 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCC GCGCCGCGGA AATTTCCGCA ATTCTGAAAA ATCAAATCAA GAACTTTGGC
CAGGACGCTG AAGTTTCCGA AGTCGGCCAG GTTCTGTCCG TCGGTGACGG TATTGCCCGC
GTCTACGGTC TGGACAATGT TCAGGCCGGT GAAATGGTCG AGTTTCCCGG TGGTATCCGG
GGCATGGCGC TGAACCTCGA ATCCGACAAT GTCGGCGTGG TTATCTTCGG CTCCGACCGC
GACATCAAGG AAGGCGACAC CGTTAAGCGG ACAGGCGCCA TCGTTGAAGT TCCTGTTGGT
CCTGAGCTGC TGGGTCGCGT TGTTGACGCT CTCGGCAATC CGATTGACGG CAAAGGTCCG
ATCAACTCGG CAATCCGTTC GCGCGTTGAC GTCAAGGCTC CTGGCATTAT TCCGCGTAAG
GGCGTTCATG AGCCGATGTC GACGGGCATC AAGGCCATCG ATGCTCTGAT TCCGGTTGGC
CGCGGCCAGC GCGAGTTGGT CATTGGCGAC CGTCAGACCG GCAAGACCGC CATCATTCTC
GACACCTTCC TCAATCAGAA GCCTGCACAT GATGCTGGTG GCGATGACAA GATGTTCTGC
GTTTACGTGG CTATCGGCCA GAAGCGCTCC ACCGTTGCCC AGTTCGTCAA GGTTTTGGAA
GAGCGTGGCG CTCTGAAATA CTCCATCATC ATCGCGGCAA CCGCTTCTGA TCCTGCTCCT
ATGCAGTATC TGGCTCCGTT CGCTGGCTGC ACGATGGGCG AATATTTCCG CGATAAGGGC
CAGCACGCCC TGATCGCTTA CGACGACTTG TCCAAGCAGG CTGTTGCTTA CCGTCAGATG
TCGCTGTTGC TGCGTCGTCC TCCGGGCCGC GAAGCTTATC CTGGTGACGT TTTCTATCTG
CATTCGCGTC TGCTTGAGCG TGCTGCCAAG CTCTCCGACG AGCGTGGCGC TGGTTCGCTC
ACCGCTCTGC CGGTGATTGA AACCCAGGGC AACGACGTGT CGGCTTTCAT TCCGACCAAC
GTGATTTCGA TCACCGACGG CCAGATCTTC CTTGAAACCG ACCTGTTCTA TCAGGGCATT
CGTCCCGCTG TGAACGTTGG TCTGTCGGTT TCGCGCGTTG GTTCTGCCGC TCAGATCAAG
GCCATGAAGC AGGTTGCTGG TTCGATCAAG GGCGAGCTTG CCCAGTATCG TGAAATGGCC
GCCTTCGCCC AGTTCGGTTC CGACCTTGAT GCTGCCACGC AGCGCTTGCT GAACCGTGGT
GCGCGCCTTA CCGAACTTCT GAAGCAGCCG CAGTTCTCCC CGTTGAAGGT GGAAGAGCAG
GTTGTTGTGA TTTTCGCGGG TGTCAACGGA TATCTCGATA AGCTTGCCGT CAGTGATGTC
GGTCGATTTG AGCATGGCGT GCTTTCCTAT CTCCGGACAG AAGGCAAGGA CATCCTTGAT
GCAATCCGCA CGGAGAAGGC TATCAGCGAT GACGTCAAGG GCAAGCTCAA GGCTGCTCTC
GATACGTTCG CAAAGTCTTT CGCCTAA
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| Protein sequence | MDIRAAEISA ILKNQIKNFG QDAEVSEVGQ VLSVGDGIAR VYGLDNVQAG EMVEFPGGIR
GMALNLESDN VGVVIFGSDR DIKEGDTVKR TGAIVEVPVG PELLGRVVDA LGNPIDGKGP
INSAIRSRVD VKAPGIIPRK GVHEPMSTGI KAIDALIPVG RGQRELVIGD RQTGKTAIIL
DTFLNQKPAH DAGGDDKMFC VYVAIGQKRS TVAQFVKVLE ERGALKYSII IAATASDPAP
MQYLAPFAGC TMGEYFRDKG QHALIAYDDL SKQAVAYRQM SLLLRRPPGR EAYPGDVFYL
HSRLLERAAK LSDERGAGSL TALPVIETQG NDVSAFIPTN VISITDGQIF LETDLFYQGI
RPAVNVGLSV SRVGSAAQIK AMKQVAGSIK GELAQYREMA AFAQFGSDLD AATQRLLNRG
ARLTELLKQP QFSPLKVEEQ VVVIFAGVNG YLDKLAVSDV GRFEHGVLSY LRTEGKDILD
AIRTEKAISD DVKGKLKAAL DTFAKSFA
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