Gene Avi_4084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4084 
Symbol 
ID7388884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3435059 
End bp3436291 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content62% 
IMG OID643652792 
Productesterase (beta-lactamase family) 
Protein accessionYP_002550965 
Protein GI222150008 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATTG TCGAGCGGGT CAACCGCGTG CTGGAAGAGG CTGTGTCAAG CGAGGCTCTG 
GTTGGGGCGG TGGTCATGGT GTTCAGGCAC GGACAGCCCC TGCTGCGGCG GGCCATTGGC
TATGCGGATC GGGAAGCGCG TATTCCGGTG CGGCTCGATA CGATTTTTCG CTTCGCATCG
GTCACAAAAC CATTTGTCGC GGCCACGGCG CTCAGCCTGA TCGACAAGGG ATTGCTGGGC
CTTGACGATC TGGTGGCCGA TCATCTTCCC TGGTTCCGGC CAAAAACGCC CGCCGGCACG
TTTGCCGCCA TCACGGTGCG TCATCTGCTC ACCCATACAT CAGGTCTGAC CTATGATCCG
GCGCTGCAAA GGCTGCCGCG CGAGCGGGCG ATCAATCTCG GTCTTCTCGA TACGGATCTG
ACGGTTGAGG AGAATTTCAG CCGCCATAAT GCCATTCCGC TGGCTTTTGC CCCTGGCGAG
CGTTGGGGCT ATTCGGTGAG CACTGATCTG CTCGGCGCTG TGGTGGCCAA AGTGCATGGC
GAGAGGCGGG CGGGAGAGCA GGGCGAAGAT GACGGGGCAG CAGCTCCGGT TCCAGGCACA
ACAAGCACGA CGGCATTCGC CCGGTATTTC GGCTCTATCG AAGGCAGAAA CCTGCTGGAG
GCGGCGGTGG TCGAGCATGT CTGCGAACCC ATGCGCCTGA CGGATGCCCG GTTTCGTGTC
ACGGATATGG CGCGGCTGGC GGTTCCGTAT CGGGACGGCG AACACAGGGC CGAGCGCATG
GAAGACCAAT GGCGGTCAAC CGGTGTATCG GGCGAAGGAC CGGCTTTTTC CCCCTCGCGA
ATTTTCAATC CGCGTGCCTT TCAGTCCGGG GGCGGGGGGA TGGCAGGCAC GGCGCTGGAT
GTGCTGACGC TGCTCGAAAC CATTCGTACT GGTGGGGGTG GACTGATGTC ACCCGAGCTT
GCGCAAATGT GTCTCTCCAA CCAGATCGGC GATCTCCCCA TGGGGCTTCC CGGCAAGCGC
TTCAGCTTTC TCGGTGCTGT CATCACCGAT TCCGCCGCAG CGGCCACCGC CCTGCCGCCG
GGCGCGGTGC AATGGGGTGG TGTCTATGGC AATACGTGGT TCATCATTCC CGAGGCCGGT
TTGACCGTGG TCAGCCTGAG CAATACGGCA TTGGAAGGCT GTGACGGTGC GTATGTCGAG
CGCTTGCGTG CTGCGGTATG CGCGACTGGA TAA
 
Protein sequence
MSIVERVNRV LEEAVSSEAL VGAVVMVFRH GQPLLRRAIG YADREARIPV RLDTIFRFAS 
VTKPFVAATA LSLIDKGLLG LDDLVADHLP WFRPKTPAGT FAAITVRHLL THTSGLTYDP
ALQRLPRERA INLGLLDTDL TVEENFSRHN AIPLAFAPGE RWGYSVSTDL LGAVVAKVHG
ERRAGEQGED DGAAAPVPGT TSTTAFARYF GSIEGRNLLE AAVVEHVCEP MRLTDARFRV
TDMARLAVPY RDGEHRAERM EDQWRSTGVS GEGPAFSPSR IFNPRAFQSG GGGMAGTALD
VLTLLETIRT GGGGLMSPEL AQMCLSNQIG DLPMGLPGKR FSFLGAVITD SAAAATALPP
GAVQWGGVYG NTWFIIPEAG LTVVSLSNTA LEGCDGAYVE RLRAAVCATG