Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4084 |
Symbol | |
ID | 7388884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3435059 |
End bp | 3436291 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643652792 |
Product | esterase (beta-lactamase family) |
Protein accession | YP_002550965 |
Protein GI | 222150008 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGATTG TCGAGCGGGT CAACCGCGTG CTGGAAGAGG CTGTGTCAAG CGAGGCTCTG GTTGGGGCGG TGGTCATGGT GTTCAGGCAC GGACAGCCCC TGCTGCGGCG GGCCATTGGC TATGCGGATC GGGAAGCGCG TATTCCGGTG CGGCTCGATA CGATTTTTCG CTTCGCATCG GTCACAAAAC CATTTGTCGC GGCCACGGCG CTCAGCCTGA TCGACAAGGG ATTGCTGGGC CTTGACGATC TGGTGGCCGA TCATCTTCCC TGGTTCCGGC CAAAAACGCC CGCCGGCACG TTTGCCGCCA TCACGGTGCG TCATCTGCTC ACCCATACAT CAGGTCTGAC CTATGATCCG GCGCTGCAAA GGCTGCCGCG CGAGCGGGCG ATCAATCTCG GTCTTCTCGA TACGGATCTG ACGGTTGAGG AGAATTTCAG CCGCCATAAT GCCATTCCGC TGGCTTTTGC CCCTGGCGAG CGTTGGGGCT ATTCGGTGAG CACTGATCTG CTCGGCGCTG TGGTGGCCAA AGTGCATGGC GAGAGGCGGG CGGGAGAGCA GGGCGAAGAT GACGGGGCAG CAGCTCCGGT TCCAGGCACA ACAAGCACGA CGGCATTCGC CCGGTATTTC GGCTCTATCG AAGGCAGAAA CCTGCTGGAG GCGGCGGTGG TCGAGCATGT CTGCGAACCC ATGCGCCTGA CGGATGCCCG GTTTCGTGTC ACGGATATGG CGCGGCTGGC GGTTCCGTAT CGGGACGGCG AACACAGGGC CGAGCGCATG GAAGACCAAT GGCGGTCAAC CGGTGTATCG GGCGAAGGAC CGGCTTTTTC CCCCTCGCGA ATTTTCAATC CGCGTGCCTT TCAGTCCGGG GGCGGGGGGA TGGCAGGCAC GGCGCTGGAT GTGCTGACGC TGCTCGAAAC CATTCGTACT GGTGGGGGTG GACTGATGTC ACCCGAGCTT GCGCAAATGT GTCTCTCCAA CCAGATCGGC GATCTCCCCA TGGGGCTTCC CGGCAAGCGC TTCAGCTTTC TCGGTGCTGT CATCACCGAT TCCGCCGCAG CGGCCACCGC CCTGCCGCCG GGCGCGGTGC AATGGGGTGG TGTCTATGGC AATACGTGGT TCATCATTCC CGAGGCCGGT TTGACCGTGG TCAGCCTGAG CAATACGGCA TTGGAAGGCT GTGACGGTGC GTATGTCGAG CGCTTGCGTG CTGCGGTATG CGCGACTGGA TAA
|
Protein sequence | MSIVERVNRV LEEAVSSEAL VGAVVMVFRH GQPLLRRAIG YADREARIPV RLDTIFRFAS VTKPFVAATA LSLIDKGLLG LDDLVADHLP WFRPKTPAGT FAAITVRHLL THTSGLTYDP ALQRLPRERA INLGLLDTDL TVEENFSRHN AIPLAFAPGE RWGYSVSTDL LGAVVAKVHG ERRAGEQGED DGAAAPVPGT TSTTAFARYF GSIEGRNLLE AAVVEHVCEP MRLTDARFRV TDMARLAVPY RDGEHRAERM EDQWRSTGVS GEGPAFSPSR IFNPRAFQSG GGGMAGTALD VLTLLETIRT GGGGLMSPEL AQMCLSNQIG DLPMGLPGKR FSFLGAVITD SAAAATALPP GAVQWGGVYG NTWFIIPEAG LTVVSLSNTA LEGCDGAYVE RLRAAVCATG
|
| |