Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4070 |
Symbol | |
ID | 7388873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3424339 |
End bp | 3424695 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643652781 |
Product | hypothetical protein |
Protein accession | YP_002550954 |
Protein GI | 222149997 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00290453 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAGAAT CACTACCTGA AATTCTGATG CGTGTTGTGA CGGAACTTCA CGACGTTGCC TATCTGATCG AGCGGGTCGA GCCGCAATTG TTGGAACTGG GTGGCTCAAA GGCGTTGGAA TCGGCTGAAA CGCTGAAAGT CTTGCAAGGT ATCGATCTCG CCGTGCAGAA ATCGCGCGGG TTGGCGGAAT TTATCGATAC CATTACGGCG GATGTGTCTG ACGACTGGAA AGTGGACATG ACGACGGCGC TCAGCCTCGT CAAGCTGGCC GAAATGCAGA AGGCACTGGG CGATGGTTTG CGCCATGGCC ATTCGCAGCC TCTCAGCAAA GCTGCGGGCG ATTTCGATTT TTTCTGA
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Protein sequence | MEESLPEILM RVVTELHDVA YLIERVEPQL LELGGSKALE SAETLKVLQG IDLAVQKSRG LAEFIDTITA DVSDDWKVDM TTALSLVKLA EMQKALGDGL RHGHSQPLSK AAGDFDFF
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