| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4062 |
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| Symbol | |
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| ID | 7388868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3417813 |
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| End bp | 3418976 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652775 |
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| Product | amidohydrolase |
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| Protein accession | YP_002550949 |
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| Protein GI | 222149992 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAATCT TGAACCGCGC CGCAGAACTG GAAGCCGATG TCCGGCAATG GCGCCATCAT
CTGCACCAGA ATCCGGAAAT TCTGTATGAC GTCCATGAGA CGGCTGCCTT TGTCACAGAA
AAACTGAAGG AATTCGGCGT CGACGAGGTG GTCACGGGTT TAGGACGCAC CGGCGTCGTT
GGCCTGATCA AGGGACGCGG CGATGGCAGC CGGGTGATCG GCCTTCGCGC CGACATGGAT
GCCCTGCCCC TTCAGGAAAT CACCGGCAAA GCCTGGGCAT CGAAAACCGA TGGCCGCATG
CATGCCTGTG GTCATGATGG CCATACCGCC ATGCTGCTGG GTGCCGCGAA ATATCTGGCC
GAGAACCGCA ATTTCAACGG CTCCGTCGCC GTAATTTTCC AGCCCGCCGA AGAAGGCGGA
GCAGGCGCGC TGGCCATGGT GGAAGACGGC CTGATGGAGC GCTTCGACAT CGCCGAAGTC
TATGGCATGC ACAACATGCC CGGCATGCCG GTTGGCACCT TCGCGATCCG CAAGGGCGGG
ATCATGGCGG CTCCGGACAA ATTCTTCATC ACCATCAAGG GCCGTGGCGG CCATGCTGCC
GAACCGCACC GCGCCATCGA TCCGATTGCC ATCGGCGCCC AGATCGTCAC CAATCTGCAA
TTGATCGCGG CGCGCAGCGC CAATCCGGTG CGCTCGGTCG TCGTCTCCGT CACTCGCTTT
CAGGCAGGAA CGACCCACAA CATCATTCCC GAGCAGGCCG AACTGACCGG TACTGTGCGC
ACCCATGACG ACGAAACACA GGACATGGCA GAGCGCCGGA TCCGCGAAAT CGTCGCTGGC
GTCGCCAGCG CCCATGGGGC AGAAGCAGAT GTGATCTATG AACGCCCCTG CCCGGTCACG
GCCAATCATC CTGAGGAAAC CGACAATGCC GCCCGCGCCG CCATCGATAT CGTCGGCGAA
GGCAATGTGA ACACCGACGT CGCCCCCTCC ATGGCAGGCG AAGACTTCGC CTTCATGCTG
AAGGCCAGAC CCGGCGCCTA TATCATGATC GGCAATGGCA ATACGGCGGG CCTTCACAAC
CCGGCCTATG ATTTCAACGA CGAAGCCATC GCCTACGGCA TTTCCTACTG GGTCAGGCTT
GCCGAACAGC GGCTGGCGGA TTGA
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| Protein sequence | MPILNRAAEL EADVRQWRHH LHQNPEILYD VHETAAFVTE KLKEFGVDEV VTGLGRTGVV
GLIKGRGDGS RVIGLRADMD ALPLQEITGK AWASKTDGRM HACGHDGHTA MLLGAAKYLA
ENRNFNGSVA VIFQPAEEGG AGALAMVEDG LMERFDIAEV YGMHNMPGMP VGTFAIRKGG
IMAAPDKFFI TIKGRGGHAA EPHRAIDPIA IGAQIVTNLQ LIAARSANPV RSVVVSVTRF
QAGTTHNIIP EQAELTGTVR THDDETQDMA ERRIREIVAG VASAHGAEAD VIYERPCPVT
ANHPEETDNA ARAAIDIVGE GNVNTDVAPS MAGEDFAFML KARPGAYIMI GNGNTAGLHN
PAYDFNDEAI AYGISYWVRL AEQRLAD
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