| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4041 |
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| Symbol | rpmB |
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| ID | 7388852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3402637 |
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| End bp | 3402927 |
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| Gene Length | 291 bp |
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| Protein Length | 96 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652759 |
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| Product | 50S ribosomal protein L28 |
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| Protein accession | YP_002550933 |
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| Protein GI | 222149976 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0227] Ribosomal protein L28 |
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| TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCCGCA GTTGCGAATT GACCGGCAAG GGCGTCCAGT CGGGTAATAA TGTAAGCCAT
GCCAACAACA AGACCCGCCG CAAGTTCCTT CCGAACCTGT GCGATGTTAC GCTGATTTCC
GATGCCCTCG GCCAGCGCTA CCGTCTGCGC GTCTCTGCTG CTGCTCTTCG TTCCGTCGAG
CATCGCGGTG GCCTGGATGC CTTCCTTTTG AAGGCAAATG AAACCGAACT GAGCATGCGC
GCTCGTCTGC TGCGCCGCCA GATCGTCAAG AAGACCGCAG TCGCCGCCTG A
|
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| Protein sequence | MSRSCELTGK GVQSGNNVSH ANNKTRRKFL PNLCDVTLIS DALGQRYRLR VSAAALRSVE
HRGGLDAFLL KANETELSMR ARLLRRQIVK KTAVAA
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