Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4035 |
Symbol | |
ID | 7388846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3397971 |
End bp | 3398732 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643652753 |
Product | hypothetical protein |
Protein accession | YP_002550927 |
Protein GI | 222149970 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGTGG ATATAGTCGA TCTTCGTCAG TTTTATCACA CCATGCTCGG TCATGCCGCC GAGCAATCCA TTACTATGGC GCTGTCGTCG CTCTGGGCGC GGCTGCCGGA GGAGCGGCTG GTGGGGCTGG GTTATTCGGT GCCGTACCTG GATCGGTTTC GGGCCGATAC CGAGCGCACA TTCGCCTTCA TGCCTGCCGG ACAAGGCGCG GTGAACTGGC CGCCGGGTGA GCTTTCGGCC ACGTCGCTGG TGTTCGATGA GGAATTGCCG CTGCCCGACA GTTCCATCGA CCGGGTTTTG ATGGTCCATT CCCTGGAATT TGCCGAGAAT CCGCGCGAGA CGCTCAAGGA AATCTGGCGG GTTCTGGCAC CGGGTGGGCG GTTGGTCATG GTTGTGCCCA ATCGTCGCGG GGTCTGGGCG CGGATGGAGC ATACGCCTTT TGGCTCCGGT CGCCCCTATT CTCGGGGCCA GTTGACGGCG CTGCTGCGCG AGACCAATTT TACCCCCGGA GCCAGCACCG AGGCATTGTT TTTCCCTCCA TCGAAGCTCA GAACCATGTT GAAAATGCAT AGTGCCTTCG AGCGCTTCGG TCGCATGCTG TCACCGGCTT TTGCCGGCGT TATTGTTGTC GAGGCGCAAA AGCGGCTCTA TCAGGGCCTG CCCGTTGCCA TGCGCGCGTC GCGCCGGGTA TTTGCTCCGG TTTTGAGCCC GCAGGGCGTG CCAACCACAC GCCAGACCCT CTTGCCGCCC TCGACAAAAT AG
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Protein sequence | MHVDIVDLRQ FYHTMLGHAA EQSITMALSS LWARLPEERL VGLGYSVPYL DRFRADTERT FAFMPAGQGA VNWPPGELSA TSLVFDEELP LPDSSIDRVL MVHSLEFAEN PRETLKEIWR VLAPGGRLVM VVPNRRGVWA RMEHTPFGSG RPYSRGQLTA LLRETNFTPG ASTEALFFPP SKLRTMLKMH SAFERFGRML SPAFAGVIVV EAQKRLYQGL PVAMRASRRV FAPVLSPQGV PTTRQTLLPP STK
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