Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4031 |
Symbol | |
ID | 7388842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3394116 |
End bp | 3394655 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643652749 |
Product | transporter |
Protein accession | YP_002550923 |
Protein GI | 222149966 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3703] Uncharacterized protein involved in cation transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTGCG ATATGGACGA ATTTTGGGTG TTTGGCTACG GATCTTTGAT GTGGAATCCC GGCTTTGTCC ATGAAGAACG GCAGGGTGCC AGGGCCCACG GGTTTCGTCG CTCCCTTTGT GTTCGATCTT TCGTGCATCG TGGCACCGAA CAGACGCCCG GTCTGGTTCT GGGGCTGGAT CGCGGCGGTT CCTGCCACGG TGTGGCGTTT CGCGTCAGTC CATCGGCATG GACGCAAACG CTGGACTATT TGCGAGCGCG GGAACTGGTG ACGATGGTCT ATCAGGAAAG AACGTTGCGC TTGCAATTGT CTGATGGACG GCGGGTGCTT GGCGTTGGTT ATGTGGTGGA CCGAAACCAC CGTCAATATG CGGGAGCGAT TACCGTTGAG GAGGCGGTAC AGGTTACCGC GCAGGCCAGC GGCCAGTCGG GTGATAACCG GGCCTATGTC GAGAATACCG TGGAACACCT GCGCAGCATA GGCATCCGTG ATCATTGGCT GGAACACGTG GTCAAGGGAC TGAACAAACC GACGTTATGA
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Protein sequence | MTCDMDEFWV FGYGSLMWNP GFVHEERQGA RAHGFRRSLC VRSFVHRGTE QTPGLVLGLD RGGSCHGVAF RVSPSAWTQT LDYLRARELV TMVYQERTLR LQLSDGRRVL GVGYVVDRNH RQYAGAITVE EAVQVTAQAS GQSGDNRAYV ENTVEHLRSI GIRDHWLEHV VKGLNKPTL
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