| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4006 |
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| Symbol | |
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| ID | 7387339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3373813 |
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| End bp | 3374646 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652730 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_002550904 |
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| Protein GI | 222149947 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCAC AGAAAAGCAT TATCGTCACC GGCTGCTCCT CCGGCATCGG AGCCTACTGC
GCCCGCGCCC TGAAGCAGGA TGGCTGGCGG GTATTTGCCA CCGTGCGCAA GGCCGAAGAC
TTAAAAGCCC TTGAGGATGA CGGTCTTGAA GCGCTGCTGA TGGATTACCG CGACACGGCA
AGCATCGCGG CCCTCGCTGA GACCGTGTTG TCGCGCACCG GCGGGCGGCT GGACGCCCTG
TTCAACAATG GCGCCTATGG ACAGGCAGGT GCGGTCGAAG ATCTGCCAAC GGAGGCGCTT
CGTGAACAGT TCGAGACCAA TGTCTTCGGC TGGCACGACC TGACACGGCG GATCGTGCCG
GTGATGCGCG CGCAAGGGTC GGGCCGTATC GTGCAATGCT CGTCTATTCT CGGCCTCATT
CCCTATCGCT GGCGCGGCGC CTATACGGCG TCCAAATTTG CGCTGGAGGG CCTGTCGCTG
ACCCTGCGCA TGGAGCTGGA CGGCAGCGGC GTCATGGTCA GCCTAATCGA GCCGGGTCCG
ATAGAAAGCC GTTTTACCGC CAATTGCCTT GAGGCCATCA AACGCAATAT CGACGTGGAA
AATTCGGTCC ATGCCGCAGA TTACCGGCGT CAATTGGCCC GCCTTGACGG CACCGGACCG
AAAAAACGCC ACAAGCTTGG ACCGGATGCC GTGTATAAAG TGTTGCAGCA CGCCTTGACC
GCGAAGCGTC CACGGCCACA TTATCTGGTC ACAAAACCGG CGAAACAGGG CGTCGCACTC
AAACGGCTGA TGCCGTCCGA TCTCTTCTAT CGGCTGATGC GGGCGCTGGA TTGA
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| Protein sequence | MAAQKSIIVT GCSSGIGAYC ARALKQDGWR VFATVRKAED LKALEDDGLE ALLMDYRDTA
SIAALAETVL SRTGGRLDAL FNNGAYGQAG AVEDLPTEAL REQFETNVFG WHDLTRRIVP
VMRAQGSGRI VQCSSILGLI PYRWRGAYTA SKFALEGLSL TLRMELDGSG VMVSLIEPGP
IESRFTANCL EAIKRNIDVE NSVHAADYRR QLARLDGTGP KKRHKLGPDA VYKVLQHALT
AKRPRPHYLV TKPAKQGVAL KRLMPSDLFY RLMRALD
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