| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4005 |
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| Symbol | |
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| ID | 7387338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3372806 |
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| End bp | 3373702 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652729 |
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| Product | ribonuclease transmembrane protein |
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| Protein accession | YP_002550903 |
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| Protein GI | 222149946 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGTCCT ATCTGGGCAG GCTTTACAAG GTGGCCTTTG ATGCGGTCTG GCATTTCACC
GAGGATGATG GTTGGGCGAT GGCGAGCCAT GTGGCGCTGT CGATCTTGCT GGCGGTGTTT
CCCTTCCTGA TCTTCGGCAC GGCGCTTGCC GGTCTTCTCG GTGCCAATAC CTTTGCACCA
ACAGCCATCC ATTTTATTTT CGATACCTGG CCGGAAGAAA TCGCCAAGCC GATTTCCGAG
CAGGTGGTGC AGGTGCTGAC CATTCCGCGC GGCGGGCTAC TGACCATTTC GGTGCTGGCG
GCAGCCTATT TCGCGTCAAA CGGGGTGGAA GCGCTACGCA CGGCGCTGAA TCGTGCCTAT
CGGGTCACGG AAACCCGGCC CTGGTATATT ACCCGGCTCA TCAGCCTTGG TTTCGTCATC
ATGGGGGTTG CCGCCTTCGC TGTCATTAGC GTGCTGCTGA TCGCTGTGCC AATTGCGCTG
CGCTTTGCCG AGCGGCAATT TCCGCTTTTG AAGGATTTCC TGGCGCTGGT ATCGAATTGG
AGCGTGCTTG GCACTCTAAT CCTGCTGGCA GTCGGTCTGA CGATTTCGCA TCTGTGGCTC
CCGGCGGACC GGCGGCGTCT GATTGATGTT CTGCCCGGCA TCTGCCTGAC GCTGTTGCTC
TGGCTGCTGG GTGCGCTGGC CTTTGCCGCC TATCTCGCCA CCTTTGCCAA TTATGCCGCC
ACCTATGCCG GTCTGGCCTC GGTTATGGTG GTGATCATAT TTCTCTACAT GCTGGGCGTG
CTGTTCCTGA TCGGCGCGGA ATTCAACGCG GCATTGATGA AGTTTTCCAG GCCGCGTACG
CGATCACGGC GAATGTCAGA CCGCAATCCC CACCAGCCTA CGGATGTCGA GGGGTGA
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| Protein sequence | MRSYLGRLYK VAFDAVWHFT EDDGWAMASH VALSILLAVF PFLIFGTALA GLLGANTFAP
TAIHFIFDTW PEEIAKPISE QVVQVLTIPR GGLLTISVLA AAYFASNGVE ALRTALNRAY
RVTETRPWYI TRLISLGFVI MGVAAFAVIS VLLIAVPIAL RFAERQFPLL KDFLALVSNW
SVLGTLILLA VGLTISHLWL PADRRRLIDV LPGICLTLLL WLLGALAFAA YLATFANYAA
TYAGLASVMV VIIFLYMLGV LFLIGAEFNA ALMKFSRPRT RSRRMSDRNP HQPTDVEG
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