| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3970 |
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| Symbol | comF |
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| ID | 7387314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3344497 |
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| End bp | 3345207 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652704 |
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| Product | competence protein F |
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| Protein accession | YP_002550879 |
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| Protein GI | 222149922 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCGCG ATCTGGTCTA TCCTCCCGGT TGCGCCACCT GCGGTCTGCC GGTTGCCAAG
GCTGGCAGCC TGTGTTCCGA TTGCTGGTGC TCGGTGCGGT TCATCGAGCG GCCTTATTGT
GAAATTCTCG GTCTGCCTTT CGGTTTTGAT CCAGGCCAGG GCATGGTCTG TGCCGAGGCG
ATTGCCAATC CTCCGGTTTT CGACCGGCTG CGGGCGGCGG TTGTGCATGA TGGTGCGGCG
CGTGATCTGG TCCATCGGCT GAAATATGGC GACAGGACCG ATCTGGCACC GATGATGGCC
CATTGGATGA TCCGGGCCGG CGGCCAGGAA CTGCTCCGCG CCGATGCGAT CCTGCCGGTG
CCGTTGCATC GCTGGCGGTT GTTTTCACGC CAATATAACC AGTCAGCGGA ACTAGGTCGG
GCGCTGGCCG GGCTGTCAGA TAAGCCATTC CTGCCGGGGG TTCTGACGCG GGTGAAGCGG
ACGCAAAAGC AGGTTGGGCT GACGGAGAAG GCACGGGCGG ACAATGTTCG TGGCGCTTTC
AAAGTGGCGG AAAACCGCCG CGATCAGGTG TTTGGCCGCC ATCTGGTGCT GGTCGATGAT
GTCTACACGA CAGGGGCCAC GGTCAGTGCT GCGACCCGCG CGCTGAAGCG GGCGGGGGCC
GTGGAAGTCA CGGTCTTGAC CTTTGCAATG GCGCTTGTAA CACCTATATG A
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| Protein sequence | MLRDLVYPPG CATCGLPVAK AGSLCSDCWC SVRFIERPYC EILGLPFGFD PGQGMVCAEA
IANPPVFDRL RAAVVHDGAA RDLVHRLKYG DRTDLAPMMA HWMIRAGGQE LLRADAILPV
PLHRWRLFSR QYNQSAELGR ALAGLSDKPF LPGVLTRVKR TQKQVGLTEK ARADNVRGAF
KVAENRRDQV FGRHLVLVDD VYTTGATVSA ATRALKRAGA VEVTVLTFAM ALVTPI
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