| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3968 |
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| Symbol | |
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| ID | 7387312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3343324 |
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| End bp | 3344181 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652702 |
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| Product | amidohydrolase |
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| Protein accession | YP_002550877 |
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| Protein GI | 222149920 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0388] Predicted amidohydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.240881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATTA CGGTTGCAGC CCTGCAAATG TGCTCAGGCA CCGATCTTGA GAAGAATGCC
GCTACCATGG CGCGTCTGGT GCGCGAGGCA GCAGCAGCAG GGGCGATCTA TGTCCAGACC
CCGGAAATGA CCGGGGCCTT GCAGCGCAAC CGTGAGGCTT TGCGGGCCAT GCTGCGCGAT
GACGACAATG ACTTGATTGC CGTGACGGCG GCTCAACTGG CTGGCGAACT GAAGATCCAT
GTCCATGTCG GTTCAACAGC GATTGCCCGT GCCGATGGGA TGATTGCCAA TCGCGGCCTG
TTGTTCGGCC CGAATGGTCG GCGGATCTGC ACCTATGACA AGATTCATAT GTTTGACGTG
GATCTGGACA ATGGTGAAAG CTGGCGGGAA AGTGCCGCTT ATGCGCCCGG CAAGAGCGCT
TGCGTTGCTG ATTTGCCCTT CGCCAGGCTC GGCTTTGCGA TTTGCTATGA TGTGCGGTTT
CCCTCGCTGT TTCGCACCGA AGCCATGGCG GGCGCCGACA TTCTGACGGT GCCAGCGGCT
TTCACCCGGC AGACCGGCGA GGCGCATTGG CACATCCTGC TCAGAGCGCG GGCCATCGAG
AATGGTGCGT TCGTCATTGC CGCCGCCCAG GGCGGTACCC ACGAGGATGG ACGCGAAACC
TATGGGCATT CGCTGATCAT CGATCCCTGG GGGAAAATCC TGGCGGAAGG CCCGGCGGCG
GGCGAGGCCG TGGTGATGGC CGAGATCGAT CTCGATGCCG TCAAGGCGGC GCGCATGAAG
ATCCCCAACC TCAAAAATGG CCGTGATTTC AATCTCGACA TGGTTCCAAC GCTGGCCAAG
GGAGGGCAGA CGGTTTGA
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| Protein sequence | MTITVAALQM CSGTDLEKNA ATMARLVREA AAAGAIYVQT PEMTGALQRN REALRAMLRD
DDNDLIAVTA AQLAGELKIH VHVGSTAIAR ADGMIANRGL LFGPNGRRIC TYDKIHMFDV
DLDNGESWRE SAAYAPGKSA CVADLPFARL GFAICYDVRF PSLFRTEAMA GADILTVPAA
FTRQTGEAHW HILLRARAIE NGAFVIAAAQ GGTHEDGRET YGHSLIIDPW GKILAEGPAA
GEAVVMAEID LDAVKAARMK IPNLKNGRDF NLDMVPTLAK GGQTV
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