Gene Avi_3966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3966 
Symbol 
ID7387310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp3342315 
End bp3342896 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content58% 
IMG OID643652700 
Producthypothetical protein 
Protein accessionYP_002550875 
Protein GI222149918 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.741088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTCCA CCCATCACCT CGCGCTCTAT AATTTCGGTC TGCATGTCGC GCCATCTGGA 
GATCCGGCCA TTCAGGGCTT TGTTGACCGC GAGCCTCTTA ATTTTGAGGC CGCTACGCGC 
TCCACGGGCT TTATCGACCG TTCCGGTTAT GAGGGCGAAC CGGGGCCCGA AAGCTGGGGC 
GTGAAGGTAT TTCCGCGTTT TATGGAAGGC AGCGGCTTTA CCTCCGGTCC ATCGTCTCTT 
TCGCTCTGGC AAGACCCGGA GACGCTGATG GCCTTCTCCT ATAGTGGCGT CCATGCTGAC 
GCCTTGAAAC ACGCTCGCCA CTGGAATGTG AAGCAGACCT GGCCTTCTTT GGTGCTGTGG 
TGGGTGCCAG TTGGCAGCAG GCCGCAATGG TCAGATGGCG TGGAAAGGCT CGAGCATCTC 
GCCGATCACG GACCGACGCC CTTCGGCTTC ACGTTCAAGC AGGCTTTTGC TGAGGATGGT 
ACATCCTATC ATCTTGACCG AGCGCGGATA AAGCAGCTTG CCACCGGCAA TTGCGCCCGC 
CAGCAGGATT TGCTGGAACG CCTTGCCTCA ATGCCTGTAT GA
 
Protein sequence
MSSTHHLALY NFGLHVAPSG DPAIQGFVDR EPLNFEAATR STGFIDRSGY EGEPGPESWG 
VKVFPRFMEG SGFTSGPSSL SLWQDPETLM AFSYSGVHAD ALKHARHWNV KQTWPSLVLW 
WVPVGSRPQW SDGVERLEHL ADHGPTPFGF TFKQAFAEDG TSYHLDRARI KQLATGNCAR 
QQDLLERLAS MPV