Gene Avi_3926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3926 
SymbolredB 
ID7387283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3292579 
End bp3293814 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content61% 
IMG OID643652667 
Productglucosyltransferase 
Protein accessionYP_002550848 
Protein GI222149891 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGAAGC CAACAAAGAT TGTCGTTTTA CTGAAAGGCT ATCCGCGCCT GTCGGAAACC 
TTTATCGCCC AGGAATTGCT GGGCCTGGAG CAGGCTGGCT TTGCGCTGGA GCTGGTGGCC
ATGCGCCGCC CGACTGACAA AAAGCGTCAT CCCGTCCATG ATGAGATCCA GGCGCCGGTG
CATTACCTGC CGGAATATCT GCATGAAGAG CCGGGGCGCG TGCTGAAAGC CCTGTGGGCC
GTGCGGCGTC TGCCCGGTTT TCGCCCGGTT CTCACACAGT TTTTCAAGGA TTTAAGGCGC
GATTTCTCCC GCAACCGGTT TCGCCGTCTG GGTCAGGCCA TGGTGCTGGT GGCCGAATGG
CCTGGCAAGG CGGATTGGCT GCATGCGCAT TTCATCCACA CGCCCGCCTC GGTCGCCTTT
TATGCCAGCC TGCTTGGCAG CAGGGGGTTC AGCGTTTCGG CCCATGCCAA GGATATCTGG
ACATCGGAAA GTTGGGATCT GGCTGATAAA TTGGCCCATG CGACCTGGGT GGTGACCTGC
ACGAAAGTCG GTTTCGACCG GTTGAGCGCT CTGGCCGATG GACGCGGTAG CGTCCACCTG
AGCTACCACG GGCTCGATCT TGATCGGTTT CCGCATTTCG AGGGCGTGCG TCCGGCCCGC
GATGGATCTG ACACCGCCGA TCCGCTGCGG TTGCTGTCGG TTGGCCGTGC GGTGAAAAAG
AAGGGCTATG ATGTGCTGCT GCGGGCGCTT TCAGCGCTTC CCGCCGATCT CAACTGGCAT
TTTACCCATA TCGGTGGCGG TGATGAACTT GTTCGGTTGC AGGCCTTGGC GGATCAGCTT
GGCATTGCCA GTCGCATCAC CTGGAAAGGG GCGATGGACC AGCGCGATGT GCTGACCCAT
TACCGCGACA GCGATCTTTT TACGCTCGCC TGTCGGATCA CCGCCGATGG CGACCGCGAC
GGCCTGCCGA ATGTGCTGGT GGAGGCCGCA AGTCAGGGGC TGATGCCGGT CAGCACCACG
GTCTCGGGGA TATCCGAACT GTTCGTCGAC GGCGAAAATG GACTGCTGGT GGAGCCTGAT
GATGCGCAGG CGCTGGCTGT GGCGCTGGAA AAGGCCATGC GTGATCCGGC CTTGCGCGCC
CGGCTCGGGT CCGCCGCCGA GGGCAAGGTG CGGCGTGATT TCGATTACCG CAACAGCATC
CGTGACCTGA CGGACTTGTT TTCTGGCCGT CAATAA
 
Protein sequence
MPKPTKIVVL LKGYPRLSET FIAQELLGLE QAGFALELVA MRRPTDKKRH PVHDEIQAPV 
HYLPEYLHEE PGRVLKALWA VRRLPGFRPV LTQFFKDLRR DFSRNRFRRL GQAMVLVAEW
PGKADWLHAH FIHTPASVAF YASLLGSRGF SVSAHAKDIW TSESWDLADK LAHATWVVTC
TKVGFDRLSA LADGRGSVHL SYHGLDLDRF PHFEGVRPAR DGSDTADPLR LLSVGRAVKK
KGYDVLLRAL SALPADLNWH FTHIGGGDEL VRLQALADQL GIASRITWKG AMDQRDVLTH
YRDSDLFTLA CRITADGDRD GLPNVLVEAA SQGLMPVSTT VSGISELFVD GENGLLVEPD
DAQALAVALE KAMRDPALRA RLGSAAEGKV RRDFDYRNSI RDLTDLFSGR Q