| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3921 |
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| Symbol | |
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| ID | 7387278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3279601 |
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| End bp | 3285120 |
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| Gene Length | 5520 bp |
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| Protein Length | 1839 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652662 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550843 |
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| Protein GI | 222149886 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.802641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTGCCT TCCTGGGTCT CATGCTGCCA GCCTCCATAC AATCAGCGAT GGCTGCCGAA
ACCAACCGCA GCATCGCCCT GACCCAGGAT GGCGATTACA GCGGCTTTGA CCTGCGCACC
GCGCAAAACG TCACGCTGGA CCAATGCCAG GCAAGCTGTA TCGATGACAA ATCCTGCCGC
GCTTTCACCT ATAATCTCAA GGCGCGCTGG TGCTTCCTGA AATCGGATTT CAACCAGATC
AGCCCCTTTG CGGGTGCTGT TGCCGGTAAG ATTGTCACCA GTGCCACTGA GCCGGATATC
GGCGCGCCCG CAAAGCTCGG CTTCATCTCC GATGGTCTGC GCGCACAAGC CAACGCGTTC
AAAGCGCGGC TGGCACAGAC GGCGGAACAG CCCGAACTGG GCCTGAACGG ATTGATCGGA
CGCGCCCATG CCAGCCTGTC GGCGGGCAAA GGCACGGACG CCCTGGCCGG GTTTCTGGCC
GCCGTCCAGC TTTCCCCTGA GGATGCCAGC CTGTGGATCA GCGCCGCTCG TGCCGCCAAC
ACCATCAAAG ATGATCGCGC AACTGCCAAT CAGGGGCTTT ACGCTGCCCT TCTCGGCTAT
GACCTGACCC GCAGCGCCAA GGAGCGAGCC GATGCACTGG CTGTGCTGGC CAAAGCGCTG
GAGAAAAACG AGAATTTTCG CGCTGCACTG AACGCCTATA AGGCGAGCCT TGAGCTTATC
GCCGATAAAT CCGTTCGCGC CGCCTATCTG GCGCTGAAAG CCACCAAGGG TTTTCGCATC
ACCGGCAATA GCGTCGATGC CGATGCCGCA TCCCCTCGCG CCTGCGTGCA ATTTTCCGAC
CCGTTGATCA ATCGCGGCAC CGACTATACC GCCTTCGTCA CCGTCAATGG CAAGCCTCCA
AAAGTGCTGG AAGCCAAGGA CAGCCAGCTT TGCATCGAGG GCCTCGACTA TGGCCAGCGC
TATACGATTG GACTGCGGGA AGGCCTGCCC TCCTCCGTCG ATGAGCCGCT GACGGCAAAG
ACCGATATCG ATGTCTATAT CCGCGACCGC AGCCCGACCG TGCGCTTTAC CGGTGATCAT
TTCGTACTGC CGTCGGCGGC ACGGCGCGGC ATTCCGCTGG TCTCTGTTAA CACCGAGAGG
GCCAATCTGA AGCTCTACCG GATTGGCGAA CGGGCGATTG CGCCGCTGAT GAGCAATTCG
CAATTTCTCT CGCAGCTCAG TGGCTACGGG GCTGACCGGA TCGAAAAGGA CAATGGCGAA
CTGGTCTGGC AAGGTGCCAT CGACATTGAA AGCAGCCTGA ACCGTGAGGT CACCACCAGT
TTTCCGGTGG ACGAGGCTCT GCCGGAACGC AAGCCCGGCA TCTATGTGCT GACAGCTGCC
GCCGCTGCCG GGAAAAGTGA CGAATGGGAA GACCGCGCCA CCCAATGGTT CCTGGTGTCC
GATATCGGCC TTTCCACCTT TGCCGGTACT GACGGGTTGA ACGTGTTTGC CCGCTCGCTG
AACTCCGCCA AGCCAATCGC CGGTGTCGAG CTGAAACTGC TGGCCCGCAA CAACGAAATC
CTCGGCACCG CCACCACCGA TGATCAGGGC CGCGCCACCT TTTCCGCTGG ATTGATGCGC
TCCGGTGCGG CGCTAGCGCC TGCCGTTCTG ACCGGCGAGC AACCGGGCAA GGATTTCGTG
TTCCTCGACA TGACCAAGGC CGGTTTCGAC CTGTCGGACC GGGGCGTCAC CGGGCGCACC
GCACCGGGTG CCATCGATAT TTTCGCCTGG ACGGAACGCG GCATCTACCG CCCCGGCGAC
ATGGTGCATG TGGCAGCCCT GGCCCGCGAC ATCGGCGCGG AAGCCATTGA CGGCCTGCCG
CTGACCTTCA TTTTCACACG CCCCGACGGC GTGGAATATC GCCGCATGGT CAGCACCGGT
GCAGGTCTTG GCGGTCATGT TGTGGATCTG GCGCTGGATA CCTCGGTGAT GCGCGGCACC
TGGACGCTGG GCATTCATGT CGATCCGAAA AAACCGGCCA TTGCCGAAAA GACCTTTCTC
GTCGACGACT TCCTGCCCGA CCGGATCGAG TTCGACCTGA AACCGGCAGC AGAGGTGCTG
AAACCCGGCA TGCCGCTGTC GGTTGGTGTC GATGGACGCT ATCTCTACGG CGCACCGGCT
GCTGGCCTTT CGCTGGAAGG CGACATGGTC ATCAAGCCGA CCCGCAGCCG CGACGACCTA
CCCGGCTTCG TCTTCGGCCT TGCCGATGAA GAGGCCGGAG ACAATAGCAG CCTGACGCTG
GACGCTCTCG AACCGCTGGA TGACAAGGGC CATGGCAGCG TCGATCTTCA GGTTGATGAT
CTGCCCGCTA CCACGCAGCT GTTGCAGGCG CAATTGTCCG TGCGCCTGAA GGAAGGCGGC
GGCCGGGCGG TGGAGCGGCA ATTGACCCTG CCGGTTGAGA CCGGCCAGCC CGCCATCGGC
ATCAAGCCAG AGTTCTCCGG CGAACTTTCC GAAAACAGCA CCGGCCATTT CCAGCTCATC
GCGCTCGACG CTGATGGCAA GCCGCAGGCG CTTCCTGGTG CAAAGTGGAA ATTGTTGAAA
TTGGAGCGCG ATTACCAATG GTATCGCGAC GGCAGCGCCT GGCGCTTCGA ACCGATCACC
ACCACCAAGC TTGCCGCCAG CGGCACGGTC GATATCGGCG CGGAGAAAAC CGATCTGCCG
ATGCCGGTCG GCTGGGGCCG TTACCGGTTG GAAGTCGATG CGCCAACACC GAATGGCGCG
GCTTCCAGCA TCGAATTCAA CGCCGGCTGG TTTGTCGAGG CGGGCTCGAC CGAAACCCCG
GACGCATTGG AAATCGGCCT CGACAAGCCG GTCTATAAAA TCGGTGAAAC GGCAAAATTG
AAAGTCTCAT CGCGCTATGC CGGTGAGGTT CTGGTGACCA TCGGCTCCGA GACCCTGATC
GCGACGCAGA CCGCCAGCCT TGCCGCCACC GGCGGTGAGA TCGATATTCC CGTCACCGAC
AATATCGGCG CGGGCACCTA TATCACCGCA ACCCTTTATC GTCCGGGCGA AAGCCAGGAG
ACCCGTATGC CGATGCGCGC CATCGGCGTC ACCTGGCTCA GTGTCGATCC GGCCAACCGC
AAGCTGGCCA TCAAGCTGAC GCCGCCGCAG CAGATCGAGC CGCGTCGCAA GCTGACCGTG
CCGATCAGCG TCACCGGTGG CGGCAATGAT GCCTATGTCA CGGTGGCGGC TGTGGATGTC
GGTATTCTCA ACCTCACCCG CTTTGAGACG CCTGACCCGG ATGGCTGGTA TTTTGGCCAG
CGGCGTCTGG GCATTGAAAT GCGCGATCTC TACGGTCAGT TGATCGACGG ATCGCTTGGT
GCCATGGGCA AGCTGCGCAC CGGCGGCGAT GGCGGCATGA TGGCCTTGCA GGCCAGCCCG
CCCAAGGAAA AACTGGTGGC GCTGTTTTCC GGCCCTGTTC ATCTCGACCA TACCGGCAAG
GCGCAGGTGG AATTTGATAT TCCGCAATTC AACGGCACCG TGCGCCTGAT GGCCGTCGCC
TGGAACCGCA CCGGCATCGG CCATGCGCAA ACCGATGTGA TTGTCCGCGA CCCCGTGGTT
ATCACAGCCT CCCTGCCGCG CTTCCTCGCC CCCGGCGATC AGGCCCGGCT CCAGCTTGAT
CTGGCCGCCA CCGATGCGCC GGATGGAGAT TATCTGCTGT CGCTGAAGGG CAATCCATCC
GTGGAAATTG ACCCTGCCAA GGCGCAGATT CCAGTGACGC TGAAGGCCGG TGCGCGGACC
AGCCTGTCGG TCGGATTGAA GGGTCTTGTC CCCGGCGATG GCACGGTTTC CGTGGCGCTT
ACCTCTACCG GAACGGCTTC TGCCGGAGAG ACAAATGGTG CAGGAACTTC TGCCACAGGC
GCAAATACCG GGGAGGCAAA GAACACTGGA CTGTCGCTCA CCCGGTCGCT GGATCTGCCG
GTGCGCCCAG CCGCGTTGCC GGTGACGACG CGGCGCGAAT TGCCGCTGGC GGCGGGTAAG
AGCCTGATCG TGGACGGCGA TCTTCTGGCC GATAGCGTGC TGCAAGGCGC GTCGCTGAGC
ATCTCGGTGT CGCGCAGTGC TAATTTCGAC ATTGCCGCCC TGCTGACAAG CCTTGACCGC
TACCCCTATG GCTGCGCCGA GCAGACCACC AGCCGGGCGC TGCCGCTGCT CTACCTCAAC
GATCTCGCCA ATGTCGCCGG TCTGCCCGCT GATGCCGATA TCAACCGGCG CATTCAGGAC
GCCATCTACC GGGTGCTGTC CTATCAGGCA GCACAGGGCA GTTTCGGCCT TTGGGCACCC
GGTTCGGAAG ACCTGTGGCT GGACGCCTAT GTCAGTGATT TCCTGACCCG CGCACGTGAA
AAGGGCTTCG ACGTACCCGA CAACGCCCTG GTGCAAGCGC TCGATAATCT GGCCAACAAG
CTCTCCTATG ACACCGATGT CGAAGCGCAG GGCAATGAGA TAGCCTATGC GCTCTATGTG
CTGGCCCGCA ATCGCCGCGC CGCGATCAGC GACCTGCGCT ACTATGCCGA TACGATGCTG
GACCGTTTCC CGACGCCGCT GTCCAAGGCG CATCTGGCTG CGGCCCTGTC GCTCTATGGC
GATCCGGTCA AGGCCGAGGC GATCTTCCGC ACCGCAAGCG CCCAGTCGCA GCAAGGCTCG
ATCACACCAG TCAGCCTGGC GCGGTCGGAT TACGGTTCGC AATTGCGCGA CGGCGCGGCC
ATTCTGGCGC TGGCCGCCGA GGCCCGGCCC GTGCCGCCGA TCATCCCGGC GCTCAGCAGG
TCGGTGATCG AAGACTGGAA GCGCAAATCC TATACCAGCA CTCAGGAGGA AAGCTGGATG
CTGCTGGCCG CCCGAGCGCT GGACAAAAGC GACGATGGCC TTGCCGTGAC CGTCAATGGC
AGCCTGAAAA CCGGCGGTTA CCGGGCGAGG ATCGAGGGCG AGGAGCTGAT GCATCAGCCG
GTGACGCTGG ACAATAGCGG GGCCGATCCG CTGACGGCAA CAGTCACCAC GGTGGCCGTG
CCGAAATATC CGCTGCCCGC GGCCAGCGAA GGCTTCACCA TCGAGCGCAG CTATTACACG
CTGTCGGGTG AGAAGGTGAA TATCAGCGAG GCGGTGCAGA ACCAGCGTTA TGTCGTGGTG
TTGAAAGTTG CCCAGACTGC TATGGGAGAA CCGAGCCTGC CAACCCAATT GCTGGTGACG
GACCTCCTCC CCGCTGGCCT GGAAATCGAC AATCCGGCCC TGGTCGGCAG TGCTGATCTG
GCCAATTTCG ACTGGCTGGG CGAGACCAAA GCCGCCCATC TGGAATTCCG CGACGACCGC
TTTGTCGCCG CCCTCGACAG CGCCAGTCAG GACAGTGGCG ACATGGTTCT GGCCTATGTG
GTGCGCGCCG TGACACCTGG TGTGTTCGAC CTCCCCGCCG CCAGCGTTGA GGATATGTAT
CGCCCGCAGC GCTACGCCCG CACCGCGATG GGACGCATGG AGGTCAAGGC AGAACAGTGA
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| Protein sequence | MLAFLGLMLP ASIQSAMAAE TNRSIALTQD GDYSGFDLRT AQNVTLDQCQ ASCIDDKSCR
AFTYNLKARW CFLKSDFNQI SPFAGAVAGK IVTSATEPDI GAPAKLGFIS DGLRAQANAF
KARLAQTAEQ PELGLNGLIG RAHASLSAGK GTDALAGFLA AVQLSPEDAS LWISAARAAN
TIKDDRATAN QGLYAALLGY DLTRSAKERA DALAVLAKAL EKNENFRAAL NAYKASLELI
ADKSVRAAYL ALKATKGFRI TGNSVDADAA SPRACVQFSD PLINRGTDYT AFVTVNGKPP
KVLEAKDSQL CIEGLDYGQR YTIGLREGLP SSVDEPLTAK TDIDVYIRDR SPTVRFTGDH
FVLPSAARRG IPLVSVNTER ANLKLYRIGE RAIAPLMSNS QFLSQLSGYG ADRIEKDNGE
LVWQGAIDIE SSLNREVTTS FPVDEALPER KPGIYVLTAA AAAGKSDEWE DRATQWFLVS
DIGLSTFAGT DGLNVFARSL NSAKPIAGVE LKLLARNNEI LGTATTDDQG RATFSAGLMR
SGAALAPAVL TGEQPGKDFV FLDMTKAGFD LSDRGVTGRT APGAIDIFAW TERGIYRPGD
MVHVAALARD IGAEAIDGLP LTFIFTRPDG VEYRRMVSTG AGLGGHVVDL ALDTSVMRGT
WTLGIHVDPK KPAIAEKTFL VDDFLPDRIE FDLKPAAEVL KPGMPLSVGV DGRYLYGAPA
AGLSLEGDMV IKPTRSRDDL PGFVFGLADE EAGDNSSLTL DALEPLDDKG HGSVDLQVDD
LPATTQLLQA QLSVRLKEGG GRAVERQLTL PVETGQPAIG IKPEFSGELS ENSTGHFQLI
ALDADGKPQA LPGAKWKLLK LERDYQWYRD GSAWRFEPIT TTKLAASGTV DIGAEKTDLP
MPVGWGRYRL EVDAPTPNGA ASSIEFNAGW FVEAGSTETP DALEIGLDKP VYKIGETAKL
KVSSRYAGEV LVTIGSETLI ATQTASLAAT GGEIDIPVTD NIGAGTYITA TLYRPGESQE
TRMPMRAIGV TWLSVDPANR KLAIKLTPPQ QIEPRRKLTV PISVTGGGND AYVTVAAVDV
GILNLTRFET PDPDGWYFGQ RRLGIEMRDL YGQLIDGSLG AMGKLRTGGD GGMMALQASP
PKEKLVALFS GPVHLDHTGK AQVEFDIPQF NGTVRLMAVA WNRTGIGHAQ TDVIVRDPVV
ITASLPRFLA PGDQARLQLD LAATDAPDGD YLLSLKGNPS VEIDPAKAQI PVTLKAGART
SLSVGLKGLV PGDGTVSVAL TSTGTASAGE TNGAGTSATG ANTGEAKNTG LSLTRSLDLP
VRPAALPVTT RRELPLAAGK SLIVDGDLLA DSVLQGASLS ISVSRSANFD IAALLTSLDR
YPYGCAEQTT SRALPLLYLN DLANVAGLPA DADINRRIQD AIYRVLSYQA AQGSFGLWAP
GSEDLWLDAY VSDFLTRARE KGFDVPDNAL VQALDNLANK LSYDTDVEAQ GNEIAYALYV
LARNRRAAIS DLRYYADTML DRFPTPLSKA HLAAALSLYG DPVKAEAIFR TASAQSQQGS
ITPVSLARSD YGSQLRDGAA ILALAAEARP VPPIIPALSR SVIEDWKRKS YTSTQEESWM
LLAARALDKS DDGLAVTVNG SLKTGGYRAR IEGEELMHQP VTLDNSGADP LTATVTTVAV
PKYPLPAASE GFTIERSYYT LSGEKVNISE AVQNQRYVVV LKVAQTAMGE PSLPTQLLVT
DLLPAGLEID NPALVGSADL ANFDWLGETK AAHLEFRDDR FVAALDSASQ DSGDMVLAYV
VRAVTPGVFD LPAASVEDMY RPQRYARTAM GRMEVKAEQ
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