| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3914 |
|---|
| Symbol | dgoK |
|---|
| ID | 7387272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 3274309 |
|---|
| End bp | 3275163 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643652656 |
|---|
| Product | 2-dehydro-3-deoxygalactonate kinase |
|---|
| Protein accession | YP_002550837 |
|---|
| Protein GI | 222149880 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3734] 2-keto-3-deoxy-galactonokinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0112503 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGGTGGATG GCGCGGGCAA TGTGCTCGGC GAGCGCCAGT CTGCCGACGG CATGTCGGCC
TGCGCGGCGG ACAACCGGTT TGCAGCCGTG TTGGAAGAAC ATCTGGAGGC GCTGTCAGCG
CCTCTGGATC TTCCGGTGGT GATCGCCGGC ATGGCGGGCG CTCGCGCCGG TTGGCTGGAA
GCGCCCTATG TCGAAACCCC CGCTTCGCTG TCCGGTCTTC ATCACCATAG CGTCAGCCCG
AAAGCATCGC GCCCGGTTTA TATTCTGCCC GGCCTCTGCC AGATCAACAC CGGCCCCTTT
GATGTGATGC GCGGCGAAGA AACCCAGCTT GCCGGTGTCG TGGCGGGTGG CATGGCTTCG
GGCGTGATCT GCATGCCCGG CACCCATTGC AAATGGGTGG ATCTGGAAAA CGGCGTGGTG
CAGAGATTTC GCACCGTCAT GACCGGCGAA CTGTTTGACC TGATTGCCAA ACAATCGATC
CTGCGCCTAT CGATCCAGCA AGCCCCGGCA GAAACCGACC AGACCGTGTT TGCCGATGCT
GTCAGCGAAG CGCTGGGCGA AAATTTCACC CTGACCACCA GCCTGTTTTC GATCCGTGCC
GCCGGTCTGC TTTCATCGCC TGGAGCCAAT GAGGCGGCCA GTCGGCTCTC CGGCCTGCTG
ATCGGCGCGG AAATCGCGGG CATGCGCGAG TGGATCGGTT CCGGCAAGAC CGTGCATATC
GTCGGCTCGA AAGCGCTCTC GGCGCTCTAT GCCAAGGCGA TCACCCTGGC GGACGGCAGT
GCCAGCATTC TTGACGGCAG CGCCCTGGTG CGCGACGGTC TGTTTGCCGC CGCCAAGGCC
ATTCTTCAAA ACTGA
|
|---|
| Protein sequence | MVDGAGNVLG ERQSADGMSA CAADNRFAAV LEEHLEALSA PLDLPVVIAG MAGARAGWLE
APYVETPASL SGLHHHSVSP KASRPVYILP GLCQINTGPF DVMRGEETQL AGVVAGGMAS
GVICMPGTHC KWVDLENGVV QRFRTVMTGE LFDLIAKQSI LRLSIQQAPA ETDQTVFADA
VSEALGENFT LTTSLFSIRA AGLLSSPGAN EAASRLSGLL IGAEIAGMRE WIGSGKTVHI
VGSKALSALY AKAITLADGS ASILDGSALV RDGLFAAAKA ILQN
|
|---|
| |