| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3900 |
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| Symbol | pntA |
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| ID | 7388580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3261559 |
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| End bp | 3263136 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652647 |
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| Product | NAD(P) transhydrogenase subunit alpha |
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| Protein accession | YP_002550828 |
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| Protein GI | 222149871 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
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| TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTGA CAATAGGCTC ACCAAAAGAA TTATATGCTG GCGAAGCGCG CGTTGCGATG
ACGCCCGACA GCGCACAACA ATTGCAGAAA CTTGGCTATG CCTGCCTGAT CGAGACGGGT
GCTGGCAAGG CGGCGGGTTT TTCCGACGAT GCCTACCGCA AAGCGGGCGT CACGGTCGCC
GATAGCGCAG ACGCGCTTTA CGCGCAGGCG GATGTGATTG CCAAGGTGCG TCCGCCGGAA
TCCTCTGAGG TGGAAAAGCT CGCGCCAGGC AAAACCCTGA TCTCCTTCTT TTATCCCGCG
CAAAATACGG CGCTGCTGGA AGAAGCCAAG GCCAAGGGCG CCAACGTTAT CGCCATGGAT
ATGGTGCCAC GCATATCGCG CGCTCAGAAA ATGGACGCGC TGTCTTCCAT GGCCAATATT
GCCGGTTATC GCGCCGTGAT CGAGGCGGGC AATAATTTTG GCCGGTTCTT CACCGGCCAG
GTGACGGCAG CGGGTAAGGT TCCGCCAGCC AAGGTGCTGA TCATCGGTGC CGGTGTCGCC
GGTCTTGCTG CCATCGGTAC GGCAACCTCG CTCGGTGCCA TCGTCTATGC GTTCGACGTT
CGCCCTGAAG TGGCCGAGCA GATTGAAAGC ATGGGCGCGC AATTCGTCTA TCTCGAATTC
GAAGCCAGCC AGGATGGGGC CGCGACCGGT GGTTATGCCG CGCCGTCTTC GCCGGAATTC
CGCGAAAAGC AATTGGCGAA GTTCCGCGAA CTGGCTCCCG ATATCGATAT CGTCATCACC
ACGGCGCTGA TCCCCGGTCG GGATGCACCA AAGCTGTGGC TGGCCGATAT GGTGGCCTCC
ATGAAGCCCG GCTCTGTCAT TATCGATCTG GCGGCTGAAC GCGGCGGCAA TTGCGATCTG
ACCGTGGCCG ACCAGCGGGT GGTGTCCGAC AATGGCGTTA TTGTCATTGG CTATACCGAT
TTCCCCAGCC GGATGGCGGC GCAATCCTCG ACGCTTTATT CCACCAACAT CCGCCATATG
ATGACGGATC TGACACCGGC CAAGGATGGC AAGCTCGTCC ATAACATGGA AGACGACGTT
ATCAGGGGCG CGACCGTGAC CTTTGAAGGC GCGATCACCT ATCCGCCACC GCCGCCCAAG
GTGCAGGCGA TTGCCGCTGC CAAGCCGAAG GAGAAGGTCA AGGAACTGAC CCATGATGAA
AAGCGGGCCA AGGAAGCTGC CGAGTTCAAG GCGCAGACCG CCAATCAGAT CAAGCTGCTG
GCGATTGGCA CGGCGGTGAT GCTGTTGGTG GGTGCTTTCG CTCCGGTCAG CTTCATGAGC
CATTTCATTG TGTTCGTTCT GGCCTGCTTC GTTGGTTTCC AGGTGATCTG GGGTGTCAGC
CATTCGCTGC ACACGCCGCT GATGGCCCTG ACCAATGCGA TTTCCGGCAT CGTCATTCTG
GGCGCATTGC TCCAGATCGG CTCCGGCAAT TGGCTGGTGG TGACACTGGC TGCACTGTCC
GTGCTGATTG CGACGATCAA TATCGTCGGC GGCTTCCTTG TGACACGGCG TATGCTCGCC
ATGTTCCAGA AGTCCTGA
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| Protein sequence | MSLTIGSPKE LYAGEARVAM TPDSAQQLQK LGYACLIETG AGKAAGFSDD AYRKAGVTVA
DSADALYAQA DVIAKVRPPE SSEVEKLAPG KTLISFFYPA QNTALLEEAK AKGANVIAMD
MVPRISRAQK MDALSSMANI AGYRAVIEAG NNFGRFFTGQ VTAAGKVPPA KVLIIGAGVA
GLAAIGTATS LGAIVYAFDV RPEVAEQIES MGAQFVYLEF EASQDGAATG GYAAPSSPEF
REKQLAKFRE LAPDIDIVIT TALIPGRDAP KLWLADMVAS MKPGSVIIDL AAERGGNCDL
TVADQRVVSD NGVIVIGYTD FPSRMAAQSS TLYSTNIRHM MTDLTPAKDG KLVHNMEDDV
IRGATVTFEG AITYPPPPPK VQAIAAAKPK EKVKELTHDE KRAKEAAEFK AQTANQIKLL
AIGTAVMLLV GAFAPVSFMS HFIVFVLACF VGFQVIWGVS HSLHTPLMAL TNAISGIVIL
GALLQIGSGN WLVVTLAALS VLIATINIVG GFLVTRRMLA MFQKS
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