Gene Avi_3899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3899 
SymbolpntB 
ID7388579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3260109 
End bp3261542 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content58% 
IMG OID643652646 
ProductNAD(P)+ transhydrogenase beta chain 
Protein accessionYP_002550827 
Protein GI222149870 
COG category[C] Energy production and conversion 
COG ID[COG1282] NAD/NADP transhydrogenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0665157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTG GTATTGTTTC TGCGGCCTAT ATTGCAGCCG CTGTGTTGTT TATCCTGTCG 
CTGGGTGGCC TGTCGGGCCA GGAAAGCGCC AAACGGGCCG TGTGGTACGG CATTGTCGGC
ATGGGCCTTG CGGTCATCGC CACGATTTTC GGCCCCGGCA TTGGCCATTG GTTCATCATT
GTACTGATGA TCGCTGGTGG GTCTGTGCTT GGCTATTACG TGGCAAACCG CGTGCAGATG
ACGGAAATGC CACAGCTTGT GGCGGCATTG CATAGCTTTG TCGGTTTGGC CGCCGTGTTT
ATCGGCTATA ACACCCATCT GGAAGAAGCC CATGTTGCCC GGTTGGACGA GACGGCGCGG
GCCGCACTCA CCGGCTTTGC CGCTATTCTC GCCCATAAAC TGCCTGTCGA ACTGTCGATC
ATGAAGGTCG AGGTGTTTCT CGGCGTCTTT ATCGGTGCCG TCACCTTCAC TGGCTCGGTC
ATTGCTTTCG GCAAGCTGGC AGGCAAGATC GATGGCAAGG CCAAGCAGTT GCCCGGCGGG
CATATGCTCA ACGCCGGTGC CGCCGCCTTG TCCTTCCTGC TGTTGATCGC CTATTTCTAC
GGCGCTGGTG CCTGGGCGCT GGTGCTGATG ACGCTGCTGG CCTTCTTCAT CGGCTATCAC
ATGATCATGG GCATTGGCGG TGCCGATATG CCGGTGGTGG TCTCGATGCT CAACAGCTAT
TCCGGCTGGG CAGCAGCGGC CATCGGCTTT ACGCTCGGCA ATGACCTGCT GATCGTGACC
GGCGCGCTGG TTGGCTCGTC AGGCGCGATC CTGTCTTACA TCATGTGCAA AGCGATGAAC
CGGTCCTTCA TCTCGGTCAT CCTCGGCGGC TTTGGCAGCA CCACTGGCCC GGCGATGGAA
ATCGAGGGCG AACAGGTGGC TATCGATGCG GAAGGCGTGG CCAATGCGCT GAACGAGGCT
GAAAGCGTGA TCATCGTGCC GGGCTACGGC ATGGCGGTGG CTCAAGCCCA GCAGGCGGTA
TCGGAACTCA CCCGCAAACT GCGTGACGCT GGCAAAAACG TGCGCTTTGC CATTCATCCG
GTGGCAGGCC GTTTGCCCGG CCATATGAAC GTGCTGCTGG CCGAAGCCAA GGTGCCTTAC
GACATCGTCA TGGAAATGGA CGAAATCAAC GACGATTTTC CAAGCACCGA CGTCGTCATC
GTCATCGGCT CCAACGACAT CGTCAACCCA GCAGCCGAAG AAGACCCCAA CAGCCCGATT
GCCGGCATGC CTGTCTTGCA GGTGTGGAAG GCCAAGCAGG TGTTCGTCTC CAAACGCGGC
CAAGGCACCG GCTATTCCGG CATCGAGAAC CCGCTATTTT ATAAGGAAAA TACGCGGATG
TTCTATGGCG ACGCGAAGAA GTCGATCACT GAATTGTTGC CGATGATTAA GTAA
 
Protein sequence
MAIGIVSAAY IAAAVLFILS LGGLSGQESA KRAVWYGIVG MGLAVIATIF GPGIGHWFII 
VLMIAGGSVL GYYVANRVQM TEMPQLVAAL HSFVGLAAVF IGYNTHLEEA HVARLDETAR
AALTGFAAIL AHKLPVELSI MKVEVFLGVF IGAVTFTGSV IAFGKLAGKI DGKAKQLPGG
HMLNAGAAAL SFLLLIAYFY GAGAWALVLM TLLAFFIGYH MIMGIGGADM PVVVSMLNSY
SGWAAAAIGF TLGNDLLIVT GALVGSSGAI LSYIMCKAMN RSFISVILGG FGSTTGPAME
IEGEQVAIDA EGVANALNEA ESVIIVPGYG MAVAQAQQAV SELTRKLRDA GKNVRFAIHP
VAGRLPGHMN VLLAEAKVPY DIVMEMDEIN DDFPSTDVVI VIGSNDIVNP AAEEDPNSPI
AGMPVLQVWK AKQVFVSKRG QGTGYSGIEN PLFYKENTRM FYGDAKKSIT ELLPMIK