Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3899 |
Symbol | pntB |
ID | 7388579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3260109 |
End bp | 3261542 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643652646 |
Product | NAD(P)+ transhydrogenase beta chain |
Protein accession | YP_002550827 |
Protein GI | 222149870 |
COG category | [C] Energy production and conversion |
COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0665157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATTG GTATTGTTTC TGCGGCCTAT ATTGCAGCCG CTGTGTTGTT TATCCTGTCG CTGGGTGGCC TGTCGGGCCA GGAAAGCGCC AAACGGGCCG TGTGGTACGG CATTGTCGGC ATGGGCCTTG CGGTCATCGC CACGATTTTC GGCCCCGGCA TTGGCCATTG GTTCATCATT GTACTGATGA TCGCTGGTGG GTCTGTGCTT GGCTATTACG TGGCAAACCG CGTGCAGATG ACGGAAATGC CACAGCTTGT GGCGGCATTG CATAGCTTTG TCGGTTTGGC CGCCGTGTTT ATCGGCTATA ACACCCATCT GGAAGAAGCC CATGTTGCCC GGTTGGACGA GACGGCGCGG GCCGCACTCA CCGGCTTTGC CGCTATTCTC GCCCATAAAC TGCCTGTCGA ACTGTCGATC ATGAAGGTCG AGGTGTTTCT CGGCGTCTTT ATCGGTGCCG TCACCTTCAC TGGCTCGGTC ATTGCTTTCG GCAAGCTGGC AGGCAAGATC GATGGCAAGG CCAAGCAGTT GCCCGGCGGG CATATGCTCA ACGCCGGTGC CGCCGCCTTG TCCTTCCTGC TGTTGATCGC CTATTTCTAC GGCGCTGGTG CCTGGGCGCT GGTGCTGATG ACGCTGCTGG CCTTCTTCAT CGGCTATCAC ATGATCATGG GCATTGGCGG TGCCGATATG CCGGTGGTGG TCTCGATGCT CAACAGCTAT TCCGGCTGGG CAGCAGCGGC CATCGGCTTT ACGCTCGGCA ATGACCTGCT GATCGTGACC GGCGCGCTGG TTGGCTCGTC AGGCGCGATC CTGTCTTACA TCATGTGCAA AGCGATGAAC CGGTCCTTCA TCTCGGTCAT CCTCGGCGGC TTTGGCAGCA CCACTGGCCC GGCGATGGAA ATCGAGGGCG AACAGGTGGC TATCGATGCG GAAGGCGTGG CCAATGCGCT GAACGAGGCT GAAAGCGTGA TCATCGTGCC GGGCTACGGC ATGGCGGTGG CTCAAGCCCA GCAGGCGGTA TCGGAACTCA CCCGCAAACT GCGTGACGCT GGCAAAAACG TGCGCTTTGC CATTCATCCG GTGGCAGGCC GTTTGCCCGG CCATATGAAC GTGCTGCTGG CCGAAGCCAA GGTGCCTTAC GACATCGTCA TGGAAATGGA CGAAATCAAC GACGATTTTC CAAGCACCGA CGTCGTCATC GTCATCGGCT CCAACGACAT CGTCAACCCA GCAGCCGAAG AAGACCCCAA CAGCCCGATT GCCGGCATGC CTGTCTTGCA GGTGTGGAAG GCCAAGCAGG TGTTCGTCTC CAAACGCGGC CAAGGCACCG GCTATTCCGG CATCGAGAAC CCGCTATTTT ATAAGGAAAA TACGCGGATG TTCTATGGCG ACGCGAAGAA GTCGATCACT GAATTGTTGC CGATGATTAA GTAA
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Protein sequence | MAIGIVSAAY IAAAVLFILS LGGLSGQESA KRAVWYGIVG MGLAVIATIF GPGIGHWFII VLMIAGGSVL GYYVANRVQM TEMPQLVAAL HSFVGLAAVF IGYNTHLEEA HVARLDETAR AALTGFAAIL AHKLPVELSI MKVEVFLGVF IGAVTFTGSV IAFGKLAGKI DGKAKQLPGG HMLNAGAAAL SFLLLIAYFY GAGAWALVLM TLLAFFIGYH MIMGIGGADM PVVVSMLNSY SGWAAAAIGF TLGNDLLIVT GALVGSSGAI LSYIMCKAMN RSFISVILGG FGSTTGPAME IEGEQVAIDA EGVANALNEA ESVIIVPGYG MAVAQAQQAV SELTRKLRDA GKNVRFAIHP VAGRLPGHMN VLLAEAKVPY DIVMEMDEIN DDFPSTDVVI VIGSNDIVNP AAEEDPNSPI AGMPVLQVWK AKQVFVSKRG QGTGYSGIEN PLFYKENTRM FYGDAKKSIT ELLPMIK
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