| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3897 |
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| Symbol | uxuA |
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| ID | 7388577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3257333 |
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| End bp | 3258526 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652644 |
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| Product | mannonate dehydratase |
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| Protein accession | YP_002550825 |
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| Protein GI | 222149868 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1312] D-mannonate dehydratase |
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| TIGRFAM ID | [TIGR00695] mannonate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.472347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAGA GCTGGCGCTG GTACGGACCC TTTGATCGCA TTACCCTGAC CGAGGTCGCC
CAGACCGGGG CCTCCGGCAT CGTCAACGCG CTGCATGAAA TACCCTATGG CGAGGTCTGG
GGCAGCGATG CCATTGCGGC AAGGCGCGAC GAGATCGCCG ATAGCGGCTT AGGCCTCACC
TGGAATGTGG TGGAAAGCCT GCCGATCCAT GAGGATATCA AGCGCGGCGA AGGCGATCTT
GAGCGGCTGT TTTCCAATTA CCGCCAATCG ATGAAGAACC TGGCCGATGC CGGTATCCAC
ACGATCTGCT ATAATTTCAT GCCATTGCTC GACTGGACCC GCACTCAGCT GGATGCGCCG
GTTGCGCGCG GCGGCACCGC CTTGCGGTTT TCCGAACCGC ATATGGCCGC CTTCGAGATC
CATATGCTGG AACGTGACGG TGCTGAAAAT GACTATTCGC CAGAGGTGCG CGAGGCCGCC
AAGGCTTGGT TCGACGCCTC CAGCGAAGGC CTGCGCCAAA ACCTGTTGAA CAGCATCATG
TCCGGCCTGC CCGGTGCCTT CGACCGCTAC GACATAAGCG GGTTGCGTGA GGCGCTGAAG
CGCTATCACG GCATCAGCCG CGATGAGATC CGCGCCAACT ATGCACGCTT CCTGGCCGAA
GTCATCCCGA CGGCGGAAGA GCTTGGCATG CGGTTTTGCG TACACCCCGA CGATCCGCCG
CGCGATATTC TCGGCCTGCC GCGCATCGTC TCCTGCGAAG ACGACATTGC CTGGATCATG
GAACAGCAAC CGGCCCTTGC CAACGGCTTG ACGCTGTGCG CGGGCTCGCT GGGTGCCAAT
CCGAAAAACG ATGTGCCTGC CATTGCCGCA CGCTTTGCCG AGCGCATCCA TTTCGCCCAT
CTGCGCAATG TGGCCAAGGA GAAGGACGGT TCCTTCCAGG AGGCCGCGCA TCTGGATGGC
GATACCGACA TGGTGACGCT GATTGCCGTG CTGATTGCCG AAGAACGCCG CCGCAAGGCA
GACGGTCGCG CCGATTTCGA AATTCCCTTC CGCCCCGATC ACGGCCACGA ATTGCTTGAC
GATGTCAGCC GTGGCACCCA TCCCGGCTAT CCGCTGGTCG GGCGTCTGCG CGGTCTGGCG
GAACTGCGCG GGGTCATTCG CGCCCTCTCT CACGGACATG TGCATTATGG CTGA
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| Protein sequence | MKESWRWYGP FDRITLTEVA QTGASGIVNA LHEIPYGEVW GSDAIAARRD EIADSGLGLT
WNVVESLPIH EDIKRGEGDL ERLFSNYRQS MKNLADAGIH TICYNFMPLL DWTRTQLDAP
VARGGTALRF SEPHMAAFEI HMLERDGAEN DYSPEVREAA KAWFDASSEG LRQNLLNSIM
SGLPGAFDRY DISGLREALK RYHGISRDEI RANYARFLAE VIPTAEELGM RFCVHPDDPP
RDILGLPRIV SCEDDIAWIM EQQPALANGL TLCAGSLGAN PKNDVPAIAA RFAERIHFAH
LRNVAKEKDG SFQEAAHLDG DTDMVTLIAV LIAEERRRKA DGRADFEIPF RPDHGHELLD
DVSRGTHPGY PLVGRLRGLA ELRGVIRALS HGHVHYG
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