| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3896 |
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| Symbol | uxuB |
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| ID | 7388576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3255867 |
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| End bp | 3257336 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652643 |
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| Product | Altronate oxidoreductase |
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| Protein accession | YP_002550824 |
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| Protein GI | 222149867 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.409973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGCTG GCTTGCCCGC TGATATATCC GCCAATCCGC AACGGCTGCG CCGCCCCGAT
AGCATCAGAC CGCAGACGGG CATTGTCCAT CTCGGGCTTG GCGCGTTCTA CCGCGCCCAT
GGGGCGATCT ATATCGAACA GGCCATGGAG AAATCCGGCG GGGATTGGGG CATTATCGGC
GTTAGCCTGA TGCGGCCCGA CCAGCGCGAT GCGCTCGCCC CCCAGGATTT CGCCTATACC
GCCGTCGAGC TTGGGCCGAA TGGCGAAACA CCGCATGTGA TCGGCGTGAT CAACGATGTG
CTGGTGGCAC GGGAAAACCA GAGAGCCGTG ATCGACGCGA TGAGCGATCC GGCTGTCAAG
ATCGTCAGCC TGACGGTAAC GGAAAAAGGC TATTGCCACG AACCCTCCAC CGGCAAACTG
AACCGCAACC ATCCCGACAT CCAGCATGAT CTGGCCTATC CAGAAGCCCC CGTCTCCGCC
CTCGGCTTTC TGGTACGGGC GCTGGAAAAG CGCCATGCGG CGGGCCTGCG TCCCTTCACG
GTGCTATGCT GCGACAACCT GCCGGAAAAC GGCAAGGTGG TGCGGGGCGT CGTGCTGGAG
CTTGCCGGAC TGATCTCATC CGATCTTCAA GGCTGGATTG CCAGTGAAGG TGCTTTTCCC
TCGACCATGG TGGATCGGAT CGTGCCCGCC ACCAAGCCGG AGGATATCGA CCGGCTGGCG
CAGATCACCG GCGTGCTGGA TCTTTCCCCC GTCATGCATG AGCCTTTCCG GCAATGGGTT
GTGGAAGACC ATTTCGTTGA TGGTGAAAGA CCGGATCTTG GCGCGGTCGG CGTCGAGCTG
GTCAAGGATG TGACGCCGTT CGAGCATATG AAGCTGCGCT GCCTGAACGG CACCCATTCC
TCACTTGCCT ATCTCGGCTA TCTCGCCGGT CACGAAACCA TTGCCCAGAC GGTGGCCGAT
CCGGTCTTTG CCCGATTCTG CAAAATGCTG TGGGACACCG AAATCACCCC CGGCCTGAAA
GCCCCACCCG GTATCAGCCT TGGCGATTAT ACAGCAGCCC TGTTTGACCG TTACGCCAAT
CCCGCCATCC GCCACCGCAC CTGGCAGATT GCCATGGACG GATCACAGAA GCTGCCGCAG
CGAATTCTCG GCACTCTGAC GGAGAACCTC GCCGCCAACC GGCCGATCAC GGGATTGGCT
TTGGCCGTTG CCGCCTGGAT GCGTTATGTT GGCGGTATCG ATGAAAAGGG CGACGCCATC
GACGTCCGCG ACCCGCTGGC CACACGATTG AAAAGCCTGA GCGATGGTGC TGCCGAGCCT
GCCGAGAAGG TCGCGGCGCT GTTGTCGGTG CGCGAGATTT TCCCTGCACC GCTGGCCGAC
AACCCAACTT TCCGCAACGC GCTGACGACA GCTTATCAAA GCCTTGTGAC CAAGGGCGCG
CGACAGACGA TAGAGGATTT GAGCCGATGA
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| Protein sequence | MEAGLPADIS ANPQRLRRPD SIRPQTGIVH LGLGAFYRAH GAIYIEQAME KSGGDWGIIG
VSLMRPDQRD ALAPQDFAYT AVELGPNGET PHVIGVINDV LVARENQRAV IDAMSDPAVK
IVSLTVTEKG YCHEPSTGKL NRNHPDIQHD LAYPEAPVSA LGFLVRALEK RHAAGLRPFT
VLCCDNLPEN GKVVRGVVLE LAGLISSDLQ GWIASEGAFP STMVDRIVPA TKPEDIDRLA
QITGVLDLSP VMHEPFRQWV VEDHFVDGER PDLGAVGVEL VKDVTPFEHM KLRCLNGTHS
SLAYLGYLAG HETIAQTVAD PVFARFCKML WDTEITPGLK APPGISLGDY TAALFDRYAN
PAIRHRTWQI AMDGSQKLPQ RILGTLTENL AANRPITGLA LAVAAWMRYV GGIDEKGDAI
DVRDPLATRL KSLSDGAAEP AEKVAALLSV REIFPAPLAD NPTFRNALTT AYQSLVTKGA
RQTIEDLSR
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