Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3896 |
Symbol | uxuB |
ID | 7388576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 3255867 |
End bp | 3257336 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643652643 |
Product | Altronate oxidoreductase |
Protein accession | YP_002550824 |
Protein GI | 222149867 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.409973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGCTG GCTTGCCCGC TGATATATCC GCCAATCCGC AACGGCTGCG CCGCCCCGAT AGCATCAGAC CGCAGACGGG CATTGTCCAT CTCGGGCTTG GCGCGTTCTA CCGCGCCCAT GGGGCGATCT ATATCGAACA GGCCATGGAG AAATCCGGCG GGGATTGGGG CATTATCGGC GTTAGCCTGA TGCGGCCCGA CCAGCGCGAT GCGCTCGCCC CCCAGGATTT CGCCTATACC GCCGTCGAGC TTGGGCCGAA TGGCGAAACA CCGCATGTGA TCGGCGTGAT CAACGATGTG CTGGTGGCAC GGGAAAACCA GAGAGCCGTG ATCGACGCGA TGAGCGATCC GGCTGTCAAG ATCGTCAGCC TGACGGTAAC GGAAAAAGGC TATTGCCACG AACCCTCCAC CGGCAAACTG AACCGCAACC ATCCCGACAT CCAGCATGAT CTGGCCTATC CAGAAGCCCC CGTCTCCGCC CTCGGCTTTC TGGTACGGGC GCTGGAAAAG CGCCATGCGG CGGGCCTGCG TCCCTTCACG GTGCTATGCT GCGACAACCT GCCGGAAAAC GGCAAGGTGG TGCGGGGCGT CGTGCTGGAG CTTGCCGGAC TGATCTCATC CGATCTTCAA GGCTGGATTG CCAGTGAAGG TGCTTTTCCC TCGACCATGG TGGATCGGAT CGTGCCCGCC ACCAAGCCGG AGGATATCGA CCGGCTGGCG CAGATCACCG GCGTGCTGGA TCTTTCCCCC GTCATGCATG AGCCTTTCCG GCAATGGGTT GTGGAAGACC ATTTCGTTGA TGGTGAAAGA CCGGATCTTG GCGCGGTCGG CGTCGAGCTG GTCAAGGATG TGACGCCGTT CGAGCATATG AAGCTGCGCT GCCTGAACGG CACCCATTCC TCACTTGCCT ATCTCGGCTA TCTCGCCGGT CACGAAACCA TTGCCCAGAC GGTGGCCGAT CCGGTCTTTG CCCGATTCTG CAAAATGCTG TGGGACACCG AAATCACCCC CGGCCTGAAA GCCCCACCCG GTATCAGCCT TGGCGATTAT ACAGCAGCCC TGTTTGACCG TTACGCCAAT CCCGCCATCC GCCACCGCAC CTGGCAGATT GCCATGGACG GATCACAGAA GCTGCCGCAG CGAATTCTCG GCACTCTGAC GGAGAACCTC GCCGCCAACC GGCCGATCAC GGGATTGGCT TTGGCCGTTG CCGCCTGGAT GCGTTATGTT GGCGGTATCG ATGAAAAGGG CGACGCCATC GACGTCCGCG ACCCGCTGGC CACACGATTG AAAAGCCTGA GCGATGGTGC TGCCGAGCCT GCCGAGAAGG TCGCGGCGCT GTTGTCGGTG CGCGAGATTT TCCCTGCACC GCTGGCCGAC AACCCAACTT TCCGCAACGC GCTGACGACA GCTTATCAAA GCCTTGTGAC CAAGGGCGCG CGACAGACGA TAGAGGATTT GAGCCGATGA
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Protein sequence | MEAGLPADIS ANPQRLRRPD SIRPQTGIVH LGLGAFYRAH GAIYIEQAME KSGGDWGIIG VSLMRPDQRD ALAPQDFAYT AVELGPNGET PHVIGVINDV LVARENQRAV IDAMSDPAVK IVSLTVTEKG YCHEPSTGKL NRNHPDIQHD LAYPEAPVSA LGFLVRALEK RHAAGLRPFT VLCCDNLPEN GKVVRGVVLE LAGLISSDLQ GWIASEGAFP STMVDRIVPA TKPEDIDRLA QITGVLDLSP VMHEPFRQWV VEDHFVDGER PDLGAVGVEL VKDVTPFEHM KLRCLNGTHS SLAYLGYLAG HETIAQTVAD PVFARFCKML WDTEITPGLK APPGISLGDY TAALFDRYAN PAIRHRTWQI AMDGSQKLPQ RILGTLTENL AANRPITGLA LAVAAWMRYV GGIDEKGDAI DVRDPLATRL KSLSDGAAEP AEKVAALLSV REIFPAPLAD NPTFRNALTT AYQSLVTKGA RQTIEDLSR
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