| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3894 |
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| Symbol | |
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| ID | 7388574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3254325 |
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| End bp | 3255146 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652641 |
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| Product | 5-keto-4-deoxyuronate isomerase |
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| Protein accession | YP_002550822 |
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| Protein GI | 222149865 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3717] 5-keto 4-deoxyuronate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.787438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGCG TTGAAACCCG CCACGCCATC GACCCGCAGA CCGCCAAAAG CTTCGACACC
ACGGCCCTGC GCAAGCATTT CCATGTCGGC GGTATTTTTG CGGCGGGCGA AATCCGGCTT
ATCTATACCC ACTACGACCG GATGATCGTC GGTGGTGCGG TGCCTGAAGG CGCTTCGCTG
GTGCTGGACC ATGTGAAGGA ATGCGGCACC GCCTCCATTC TCGACCGGCG CGAACTTGTC
GTCGTCAACA TCGGCGGCAC CGGCACGGTC GAGGCGGATG CCACCTATGA AATGGGCAAG
GGCGACATGC TCTATCTCGG CATGGGCGCG GGCAAGATCA CCTTTTCAGG CGCTGGCCGG
TTCTACATTC TCTCGGCCCC GGCCCATCAC ACCTATCCGT CGCGCCTCAT CAAGATTGAG
GAAGCCGCCA ATGTGACGCT TGGCTCGCAG GCGACCTCCA ACGAGCGCAC GATCTACCAG
TTCGTGCATC CTGACGTCAT GAAGGCCTGC CAGCTGGTGG TCGGCATGAC CAAGCTTGCC
CCCGGCTCCG TCTGGAACAC CATGCCCGCC CATGTCCATG ACCGGCGCAT GGAAGCCTAT
CTGTATTTCG ACCTGCCGGA AGGCCAGCGC GCTTTCCATA TGATGGGCGA GCCGGACGAG
ACCCGTCATC TGGTGCTGAA AAACGAGGAA GGCGCGATTT CGCCGCCCTG GTCGATCCAT
TCGGGTGCAG GTACCGCCAA TTACACTTTC ATCTGGGCGA TGGCCGGTGA CAATGTCGAT
TACAAGGATG TCGAAGTGGT CTCGATGGAG ACGCTGAAGT GA
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| Protein sequence | MLSVETRHAI DPQTAKSFDT TALRKHFHVG GIFAAGEIRL IYTHYDRMIV GGAVPEGASL
VLDHVKECGT ASILDRRELV VVNIGGTGTV EADATYEMGK GDMLYLGMGA GKITFSGAGR
FYILSAPAHH TYPSRLIKIE EAANVTLGSQ ATSNERTIYQ FVHPDVMKAC QLVVGMTKLA
PGSVWNTMPA HVHDRRMEAY LYFDLPEGQR AFHMMGEPDE TRHLVLKNEE GAISPPWSIH
SGAGTANYTF IWAMAGDNVD YKDVEVVSME TLK
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