| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3890 |
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| Symbol | kdgK |
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| ID | 7388570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3250266 |
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| End bp | 3251180 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652637 |
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| Product | 2-dehydro-3-deoxygluconokinase |
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| Protein accession | YP_002550818 |
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| Protein GI | 222149861 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.413281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGGCA AACGGATCTT GGCCATCGGC GAATGCATGG TGGAAATGGC GCCCCGCGAA
GACGGTGCCT ATCATCGCAA TTTTGCTGGC GATACATTCA ACACTGCCTG GTATCTGCGT
CGCCTTCTGG GCGCTGACGA CGTGGTGGAT TACTGCTCGG CTATCGGCGT CGATGGTATT
TCGCAAGCCA TGCTCACCTT CATACAAGCG GCGGGAATAG GCACAGGGCA TTTGCGCCGA
TTGGAGGATG CGACGGTCGG GCTTTATATG ATCGAGCTTG CCAATGGCGA GCGCAGTTTC
AGCTATTGGC GCGGCCAATC CGCTGCCAAG CGTCTGGCAG ACGACCGGGA GTTTCTTTTA
GAGGCCGTGC GAGACCGCGA TCTCATTCTG TTTTCCGGTA TTACCCTTGC CATCCTGTCC
CCGGCGGGCC GCCAGCAATT GCTGGAGGTT CTGGCGCAGG CACGCGATGC TGGCAGCCTG
ATCGCTTTCG ATCCTAATAT GCGCGCCCGG CTTTGGCCGG ATCGTGACAG CATGTGCAAT
GCGGTTTCGC AGGCGGCCAA GATTGCCGAT ATTGTCCTGC CGTCCTTTGA CGAGGATGGG
CCGAATTTCA ACGATGCCAC ACCTGACGCC ACGATTATCC GATACCGTGA AGCAGGTGCG
GCCACCGTGG TGGTCAAGAA TGGCGCGGGC CGTGTGCATG CCTTTGACGC AGCAGAAGGG
CCAGTGACAT TCGATCCCGT GCCGGTCGCC GATCTCGTCG ATACGACAGC AGCTGGCGAT
AGTTTCAATG CCGGTTTCCT GTCGGCCCGC CTTTCGGGTG TCGCGATGGC TGAGGCATTG
GCGCAAGGAG CTGCCGTTTC CGCTCAGGTG ATCCGTAAGC GAGGCGCTTT GGTGAAGATC
GAAAATATCC TCTGA
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| Protein sequence | MSGKRILAIG ECMVEMAPRE DGAYHRNFAG DTFNTAWYLR RLLGADDVVD YCSAIGVDGI
SQAMLTFIQA AGIGTGHLRR LEDATVGLYM IELANGERSF SYWRGQSAAK RLADDREFLL
EAVRDRDLIL FSGITLAILS PAGRQQLLEV LAQARDAGSL IAFDPNMRAR LWPDRDSMCN
AVSQAAKIAD IVLPSFDEDG PNFNDATPDA TIIRYREAGA ATVVVKNGAG RVHAFDAAEG
PVTFDPVPVA DLVDTTAAGD SFNAGFLSAR LSGVAMAEAL AQGAAVSAQV IRKRGALVKI
ENIL
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