| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3889 |
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| Symbol | |
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| ID | 7388569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3248969 |
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| End bp | 3250021 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652636 |
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| Product | dipeptidase |
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| Protein accession | YP_002550817 |
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| Protein GI | 222149860 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.741978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTGG TTTTCGACGG GCATAATGAT GTCCTCCTGC GTTTGTGGAG GGCTCATGCA
GCGGGCGTCG ATCCGGTGCG GCAATTCATC AATGGCACAC GGGAAGGTCA TATCGATGCG
CCACGCGCCC GCCGGGGCGG GCTTGGTGGC GGTCTCTGCG CGATTTATAT TCCCTCCGAT
GGCGAGTTCG TGCTGACCGA GCCGGATGAC AAGGGCCACT ACAATACCCC TGTTGATAAG
CCCCTGGCGC GTGCATCCTC ACTCGACATC GCCTTGCAGA TGGCCGCGAT TGCGCTGCGG
GTCGAGCGGG CGGGGGGCTG GCGGCTGTGC CGCTCGACAT CGGATATTCG CGCTGCAATG
GCCGAGGGCG TCTTTGCCGC CGTGCTGCAT ATGGAAGGCT GCGAGGCCAT CGATGCTGAT
CTGGCCGCCC TTGAGGTGTT TTACCAGGCG GGCCTGCGCA CGCTCGGCCC GGTCTGGAGC
CGCCCGAATA TTTTCGGGCA TGGTGTTCCC TTCGCCTTTC CAATGTCGCC GGATACCGGG
CCGGGTCTGA CGACACTCGG TTTTGAGCTT GTGAAAGCCT GCGACCGGCT GGGCATTGCC
CTCGACCTTG CCCATATCAC CGAAAAGGGC TTCTGGGACG TGGCGAAAAC CTCCGACAAA
CCGCTGATCG CCAGCCATTC CAATGCGCAC GCGCTGACAC CAGTGGCCCG CAACCTGACG
GATCGGCAGA TGGACGCGAT CCGCGAGCGC AAGGGCATCG CCGGTTTGAA TTACGCCGTG
ACCATGCTGC GCTCCGATGC CCGCGATTTT GCCGAGACCC CGCTGTCAGA TATGGTACGC
CATATCGACT ATATGGTGGA ACGCATGGGT ATCGATTGCG TCGGCCTCGG CTCCGATTTC
GACGGTTGCA CGGTGCCCGG TGCAATCGGT GATGCCAGTG GGAACCAGAG GTTGCTTGAA
GCGTTGCAAT CGGCTGGATA CGGTGATGCA GATATTGCTA AGATTGCCCG TGAAAACTGG
CTGCGGGTGC TGGGGACGAC GTGGGGCGAG TAA
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| Protein sequence | MQLVFDGHND VLLRLWRAHA AGVDPVRQFI NGTREGHIDA PRARRGGLGG GLCAIYIPSD
GEFVLTEPDD KGHYNTPVDK PLARASSLDI ALQMAAIALR VERAGGWRLC RSTSDIRAAM
AEGVFAAVLH MEGCEAIDAD LAALEVFYQA GLRTLGPVWS RPNIFGHGVP FAFPMSPDTG
PGLTTLGFEL VKACDRLGIA LDLAHITEKG FWDVAKTSDK PLIASHSNAH ALTPVARNLT
DRQMDAIRER KGIAGLNYAV TMLRSDARDF AETPLSDMVR HIDYMVERMG IDCVGLGSDF
DGCTVPGAIG DASGNQRLLE ALQSAGYGDA DIAKIARENW LRVLGTTWGE
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