| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3886 |
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| Symbol | |
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| ID | 7388566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3245262 |
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| End bp | 3246167 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643652633 |
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| Product | ABC transporter membrane spanning protein (oligopeptide) |
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| Protein accession | YP_002550814 |
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| Protein GI | 222149857 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCCTTC GCGAGTGGCT GCTGTCGGAC CGGCCCCAAT CACGCCGGCA GGCCCGGCTT
GGCCGCGCCT ATGTCATCTG GCGGCAGTTT TCGGCCAATC GGCTGGCGCT GCTGGGGCTT
GGCATCATTA TCGCGCTCAT TCTGGTTGCT GCTTTTGCCA ATCTGCTCGC CACCCACAAT
CCGGTGCAGG GCGATCTTGC CAATGCAAGG TTAATGGCGC CCGGTACCGG TGGTTTCTGG
CTCGGCAGCG ACGATCAGGG CCGCGACATC TATTCGCGGC TGATCTACGG GTCGCGGCTG
ACATTGATGG TGGTGGTGCT GGTAGCAATC ATTGCCGCAC CCATCGGTCT GCTGGTCGGC
ACGGTGGCCG GTTATGCGGG CGGCTGGGTC GATGCGGTGC TGATGCGGTT GACCGATATT
TTCCTGGCCT TTCCGAAGCT CGTTCTGGCT CTGGCGCTGG TCGCAGCCCT CGGCCCCGGC
ATTGAAAACG CCATTCTGGC CATCGCCGTC ACCTCCTGGC CGCCTTATGC GCGCATCGCC
CGGGCCGAAA CGCTGACGGT TCGCAATTCC GATTATATCT CTGCCGTCAA GCTGATGGGC
GCTTCGCCCT TTCGCATCGT GCTGCGCCAT ATCATGCCGC TCTGTCTGTC CTCGCTGATT
GTCCGCGTTA CGCTGGATAT GGCGGGTATT ATCCTGACGG CGGCCGGTCT CGGCTTTCTG
GGCCTTGGCG CCCAGCCGCC CCTGCCGGAA TGGGGGGCGA TGATTGCCGA TGGCCGCCGT
TTCATTCTCG ATCAATGGTG GGTTGCCGCC ATGCCGGGCT TTGCCATCCT GATCGTCAGC
CTCGGCTTCA ACCTGCTGGG CGATGGCCTG CGCGATGCGC TGGACCCGAA GGAGGCCGGC
CAATGA
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| Protein sequence | MSLREWLLSD RPQSRRQARL GRAYVIWRQF SANRLALLGL GIIIALILVA AFANLLATHN
PVQGDLANAR LMAPGTGGFW LGSDDQGRDI YSRLIYGSRL TLMVVVLVAI IAAPIGLLVG
TVAGYAGGWV DAVLMRLTDI FLAFPKLVLA LALVAALGPG IENAILAIAV TSWPPYARIA
RAETLTVRNS DYISAVKLMG ASPFRIVLRH IMPLCLSSLI VRVTLDMAGI ILTAAGLGFL
GLGAQPPLPE WGAMIADGRR FILDQWWVAA MPGFAILIVS LGFNLLGDGL RDALDPKEAG
Q
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