| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3879 |
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| Symbol | |
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| ID | 7388559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3236274 |
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| End bp | 3237326 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652626 |
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| Product | ABC transporter |
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| Protein accession | YP_002550807 |
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| Protein GI | 222149850 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATGG TCATCTATGC CTTCAGCCTG GCGATCTATA CCCAGGCGAC CGGTCTTTCC
CACGATCTGC GCAATGCGAC GCTGGCCGTG GTGGACCGGG ACATGTCGCA ATTGTCGTCT
TCCATTCTCG ACGGATTGAT GCCGCCGCGC TTTCAAAAGC CGGTGGCAAT CGCGCCCCAG
GATATCGACC GCGCTATGGA TCAGGCGCGC TACACCTTTG TGCTGGATAT TCCCGAACGG
TTCGAGGCTG ATGTTTTGGC CGGGCGTAGC CCCTCGGTGC AGTTGCTGAT TGACGCGACC
GCGTTGATGC AGGCGGGGGT GGGCTCCAGC ACCATCCAGC AGATCGTCAG CCAGCAGGTC
GGGCTTTATG CCCAGCGTGT CGGCGTCTCA AGCAGTCAGG CGGTAACGGT GGAAACACGG
CTCGCCTTCA ATCAATCGCT GAATTCGGAG TGGTTTTCCG GCACGATGGC GCTGATCAAC
AATATTACCA TGCTGGCCAT CCTGCTGGCG GGCGCCGCTT TGGTACGCGA ACGGGAACAT
GGGACGCTGG AACATTTGTT GGTCATGCCG GTCAGGCCTG TCGAAATCAT GGTCAGCAAG
CTTGCCGCCA ATGGTCTGGT TATTCTGGTC ATGACGCTGT TTGCCATCGT CACCGTGTTG
GTCAAGGTGC TCGGCATGCA CATTACCGGC TCACTGACGC TCTATATGGC GGGCGTGGCG
CTCTACCTGT TCTTCGTCAC CTCGTTCGGG CTGTTTTTAG GGACGCTGGC CCGCAGCATG
CCGCAACTGG CGCTGCTGTT CATCCTCACC GCTTTGCCGA TGAATATCCT GTCAGGCGGG
TTCACCCCGC TGGAAAGCCA GCCGCAATGG CTGCAAAACG CCATGCAGGT CTCACCTTCG
ACCCATTTCG TCGCCTTTTC ACAGGCCATT CTCTATCGCG GCGCGGGCTT CGATGTGGTC
TGGCCGCAAT TTACCGCGAC GCTTGGCATC GGGCTGATAT TTTTCCTGTT CAGTCTCAGC
CGGTTCCGGA CGTTCATCGC CGCGCAGCAG TGA
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| Protein sequence | MAMVIYAFSL AIYTQATGLS HDLRNATLAV VDRDMSQLSS SILDGLMPPR FQKPVAIAPQ
DIDRAMDQAR YTFVLDIPER FEADVLAGRS PSVQLLIDAT ALMQAGVGSS TIQQIVSQQV
GLYAQRVGVS SSQAVTVETR LAFNQSLNSE WFSGTMALIN NITMLAILLA GAALVREREH
GTLEHLLVMP VRPVEIMVSK LAANGLVILV MTLFAIVTVL VKVLGMHITG SLTLYMAGVA
LYLFFVTSFG LFLGTLARSM PQLALLFILT ALPMNILSGG FTPLESQPQW LQNAMQVSPS
THFVAFSQAI LYRGAGFDVV WPQFTATLGI GLIFFLFSLS RFRTFIAAQQ
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