Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3858 |
Symbol | gltX |
ID | 7388542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3204019 |
End bp | 3205473 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643652609 |
Product | glutamyl-tRNA synthetase |
Protein accession | YP_002550790 |
Protein GI | 222149833 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.131091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACTT CCGGCGTCCG CGTCCGTATC GCTCCTTCTC CCACCGGTGA ACCGCATGTC GGCACAGCCT ATATCGCGCT GTTCAACTAT CTGTTCGCAA AGAAACACGG CGGTGAATTC ATTCTGCGCA TCGAGGATAC CGATGCGACC CGCTCGACGG CGGAATTTGA GCAGAAGGTG CTGGACGCGT TGAAATGGAC CGGCCTGACC TGGGCCGAAG GCCCGGATGT TGGCGGTCCC TACGGTCCCT ACCGCCAGTC CGAGCGCAAG GACACCTATC GTCCGTTCGT CGACAAGATG GTGACTGAGG GCAATGCGTT CCGCTGTTTC TGCACGCCCG CCCGGCTGGA CCAGATGCGC GAAGCGCAGC GCGCAGCGGG CAAGCCGCCC GGCTATGACG GTCTCTGCTT GCATTTGAAG GCGGAAGAAG TCGATGCGCG CGTTGCCGCA GGCGAGCCGC ATGTCGTGCG CCTGAAAATC CCAACCGAAG GCTCCTGCGA TTTCCATGAC GGCGTTTATG GCGACGTGTC GATCCCGTGG GAAAGCGTCG ATATGCAGGT TCTGCTGAAA GCAGACGGCA TGCCGACCTA TCACATGGCC AATGTGGTTG ATGACCACCT GATGAAGATC ACCCATGTGG CGCGCGGCGA GGAATGGCTG GCCTCCGTGC CGAAGCATAT CCTGATCTAC AAATATCTCG GTCTTGAGCC GCCGGTGTTC ATGCATCTCA GCCTGATGCG CAATGCCGAC AAATCCAAGT TGTCGAAGCG CAAGAACCCG ACCTCTATTT CTTATTATTC GGCCCTCGGC TACCTGCCCG AAGCGCTGAT GAATTTCCTT GGCCTGTTCT TCATGCAGAT CGCCGAAGGC GAAGAGCTGT TGACGATGGA CGAGCTGATC GCCAAGTTCG ACCCCGACAA TCTCTCCAAG GCGGGTGCTA TCTTCGACAT CCAGAAGCTC GACTGGCTGA ACGGTCGCTG GCTGCGCGAA AAGCTGACGC CGGACGAATT CCTGGGCCGC GTTCTGACCT GGGCCAGCGA AAACGACAGG CTGACGGAAG GCCTGAAGCT CGCTCAGAGC CGGATCACCA AGCTTGGCGA ATTGCCGCCG CTGGCAGGCT TCCTGCTGGC CAATGATGTC GGCCTGACGC CTGCTTCCTT CGGCGGGTTG AAAACCAGCC CGGCGGAAAC GCTTGAGATC GTCACCACCG TTCAAGCCGA TCTCGAAAAG ATCCTCGAAT GGAATGTTGC GACCATCGAG GAAGAACTGC GGGCCATTGC CGACCGGTTG GGCAAGAAGC TGCGCGTCGT CACCCCGCCG TTGTTCGTTG CCGTTTCCGG CAGCCAGCGT TCTCTGCCGC TGTTTGACAG CATGGCGCTG CTGGGCCGTT CCGTGGTGCG CCAGCGCCTC AAGGTGGCCA TTCAGGTCTT GACCTCCATG GCTGGCGCGG CCTGA
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Protein sequence | MTTSGVRVRI APSPTGEPHV GTAYIALFNY LFAKKHGGEF ILRIEDTDAT RSTAEFEQKV LDALKWTGLT WAEGPDVGGP YGPYRQSERK DTYRPFVDKM VTEGNAFRCF CTPARLDQMR EAQRAAGKPP GYDGLCLHLK AEEVDARVAA GEPHVVRLKI PTEGSCDFHD GVYGDVSIPW ESVDMQVLLK ADGMPTYHMA NVVDDHLMKI THVARGEEWL ASVPKHILIY KYLGLEPPVF MHLSLMRNAD KSKLSKRKNP TSISYYSALG YLPEALMNFL GLFFMQIAEG EELLTMDELI AKFDPDNLSK AGAIFDIQKL DWLNGRWLRE KLTPDEFLGR VLTWASENDR LTEGLKLAQS RITKLGELPP LAGFLLANDV GLTPASFGGL KTSPAETLEI VTTVQADLEK ILEWNVATIE EELRAIADRL GKKLRVVTPP LFVAVSGSQR SLPLFDSMAL LGRSVVRQRL KVAIQVLTSM AGAA
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