| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3854 |
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| Symbol | |
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| ID | 7388539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3200048 |
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| End bp | 3200953 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652606 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550787 |
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| Protein GI | 222149830 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0943127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATCGA CTTCGCTTGG CTATGTCTTT GCCTTTGCCG CCTATACGGT ATTTTCCATG
CAGGATGGCA TTTCCAAGCA TCTGGGCGAT AGCTATTCGC CCGTCGTGGT CGCCACCGTG
CGCTATTGGG CCTTTGCGAT CTTCGCGCTC ATTCTGGCCG CCCGCAGCCG CAATGGTCTG
GTCGCGGCAG TCAAAACCAA ACGGCCTATC CTGCAAATCC TGCGGGGCCT GTTGCTGGGC
GCGCAGATCC TGGTGTCGAT TGCTGCCTTT CACTATGTCG GACTTGCCCA ATCGCAGGCA
ATCTTTGCCG CCGGGCCAAT TTTCGTGGCG CTGCTGTCGG TGCCGCTGCT GGGCGAGCAG
GTGGGCTGGC GGCGCTGGAC GGCGATCCTG GTCGGCATGC TCGGCGTGGT GCTGATCCTT
TCGCCGGGCT CAGGCAGTTT CAGCCTGATG GTGGCGCTGC CACTGTTCTG CGCGCTTTCA
GGGGCTTTTT ACGGCATTCT GACGCGGCTG GTCAGCCGTG ATGATCCGCC CGTCACCAGC
TTTTTCTATA TGTGCATGGT CGGCTTTGTC GGGGCCAATT GCATGGCACC ATTTTTCTTG
GCTCCGATTG CCAGACAGGA TTGGTTCTGG ATGTTGGCGC TGTGCTGCAC CGGCATTGCC
GGGCATTTTT CGCTGATCAA GGCCTATGAG CACTTGAATG CCGTGGTGCT ACAACCGATT
GCCTATTACC AGCTAGTGTT AGGCTCAATC ATCGCAGTAA CGGTGTTTGG CGAAAGCCTG
ACCCACAATA TGGTGCTGGG CTCGGTCATC GTGGTGGGTG CTGGCCTGTT CACCGTCTGG
CGCGAACAGG TGGTGGCGCG GCGAAAAGCG CTTGAGGTTC AATCTATTGC AGAACCTGCT
TCTTAA
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| Protein sequence | MKSTSLGYVF AFAAYTVFSM QDGISKHLGD SYSPVVVATV RYWAFAIFAL ILAARSRNGL
VAAVKTKRPI LQILRGLLLG AQILVSIAAF HYVGLAQSQA IFAAGPIFVA LLSVPLLGEQ
VGWRRWTAIL VGMLGVVLIL SPGSGSFSLM VALPLFCALS GAFYGILTRL VSRDDPPVTS
FFYMCMVGFV GANCMAPFFL APIARQDWFW MLALCCTGIA GHFSLIKAYE HLNAVVLQPI
AYYQLVLGSI IAVTVFGESL THNMVLGSVI VVGAGLFTVW REQVVARRKA LEVQSIAEPA
S
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