Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3850 |
Symbol | tal |
ID | 7388537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 3197936 |
End bp | 3198892 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652604 |
Product | transaldolase B |
Protein accession | YP_002550785 |
Protein GI | 222149828 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.866528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTTCGA AACTCGAACA GCTTCGCGCC ATGACCACGG TTGTCGCCGA TACCGGTGAC ATTGAGGCCG TAACCCGCCT GAAGCCGGTG GATTGCACCA CCAACCCGAC CATCGTGCTG AAAGCCTTGG GCACCGACAT GTTTGCCGAT GCCTTTGAAG AGGCGATCAA ATGGGGCAAA GCCAAGGGCG GCGCCTCTGA TGCCGTGACC GAGGCGATTG CCGACCGGCT GGCGATTTCG GTTGGTGCGG CGCTTGCCAA GATCGTGCCG GGCCGGGTCT CGACAGAAGT GGATGCTGAT CTGTCCTTCG ATACGCAGGC CTCGCTCAAC AAGGCCCGCG CCATCATTGC CCAGTATAAG GAGCGTGGCA TCGAGAAGGA TCGCATCCTG ATCAAGCTCG CCTCCACCTG GGAAGGCATT CGCGCCGCCG AAGTGCTGCA AAAGGAAGGC ATCGACTGCA ACCTGACCCT GCTGTTTTCC AAGGCCCAGG CCATTGCCTG CGCGGAAGCC AAGGTGTTCC TGATTTCGCC TTTCGTTGGC CGTATTCTCG ATTGGTACAA GAAATCGACC GGTGAAAACT ACACCTCTGA GACCGATCCG GGCGTGGTGT CAGTGCGTCA GATCTATAAT TTCTACAAGG TCAATGGCAT CGAAACCATT GTCATGGGCG CGTCGTTCCG CAATGCGGGC GAGATCGAAG CGCTTGCCGG TTGCGACCGG TTGACAATCA GCCCAGCGCT GCTGGACGAG CTGGATGCGG CAACTGGCGA TCTGCCCCGC GTGCTGTCTC CTGAGAAGAC CACGCCCGAT CCGCTGGTGT CGCTGGATGA AAAGGCGTTC CGCTGGGCGC TGAACGAAGA TGCCATGGCG ACGGAAAAGC TGTCGGAAGG CATTCGCGCC TTCGCCAAGG ATCTTGGCAC CCTACGTGGC ATGGTGGCAA AGAAGCTGGC CGCCTGA
|
Protein sequence | MTSKLEQLRA MTTVVADTGD IEAVTRLKPV DCTTNPTIVL KALGTDMFAD AFEEAIKWGK AKGGASDAVT EAIADRLAIS VGAALAKIVP GRVSTEVDAD LSFDTQASLN KARAIIAQYK ERGIEKDRIL IKLASTWEGI RAAEVLQKEG IDCNLTLLFS KAQAIACAEA KVFLISPFVG RILDWYKKST GENYTSETDP GVVSVRQIYN FYKVNGIETI VMGASFRNAG EIEALAGCDR LTISPALLDE LDAATGDLPR VLSPEKTTPD PLVSLDEKAF RWALNEDAMA TEKLSEGIRA FAKDLGTLRG MVAKKLAA
|
| |