Gene Avi_3850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3850 
Symboltal 
ID7388537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3197936 
End bp3198892 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content59% 
IMG OID643652604 
Producttransaldolase B 
Protein accessionYP_002550785 
Protein GI222149828 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.866528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCGA AACTCGAACA GCTTCGCGCC ATGACCACGG TTGTCGCCGA TACCGGTGAC 
ATTGAGGCCG TAACCCGCCT GAAGCCGGTG GATTGCACCA CCAACCCGAC CATCGTGCTG
AAAGCCTTGG GCACCGACAT GTTTGCCGAT GCCTTTGAAG AGGCGATCAA ATGGGGCAAA
GCCAAGGGCG GCGCCTCTGA TGCCGTGACC GAGGCGATTG CCGACCGGCT GGCGATTTCG
GTTGGTGCGG CGCTTGCCAA GATCGTGCCG GGCCGGGTCT CGACAGAAGT GGATGCTGAT
CTGTCCTTCG ATACGCAGGC CTCGCTCAAC AAGGCCCGCG CCATCATTGC CCAGTATAAG
GAGCGTGGCA TCGAGAAGGA TCGCATCCTG ATCAAGCTCG CCTCCACCTG GGAAGGCATT
CGCGCCGCCG AAGTGCTGCA AAAGGAAGGC ATCGACTGCA ACCTGACCCT GCTGTTTTCC
AAGGCCCAGG CCATTGCCTG CGCGGAAGCC AAGGTGTTCC TGATTTCGCC TTTCGTTGGC
CGTATTCTCG ATTGGTACAA GAAATCGACC GGTGAAAACT ACACCTCTGA GACCGATCCG
GGCGTGGTGT CAGTGCGTCA GATCTATAAT TTCTACAAGG TCAATGGCAT CGAAACCATT
GTCATGGGCG CGTCGTTCCG CAATGCGGGC GAGATCGAAG CGCTTGCCGG TTGCGACCGG
TTGACAATCA GCCCAGCGCT GCTGGACGAG CTGGATGCGG CAACTGGCGA TCTGCCCCGC
GTGCTGTCTC CTGAGAAGAC CACGCCCGAT CCGCTGGTGT CGCTGGATGA AAAGGCGTTC
CGCTGGGCGC TGAACGAAGA TGCCATGGCG ACGGAAAAGC TGTCGGAAGG CATTCGCGCC
TTCGCCAAGG ATCTTGGCAC CCTACGTGGC ATGGTGGCAA AGAAGCTGGC CGCCTGA
 
Protein sequence
MTSKLEQLRA MTTVVADTGD IEAVTRLKPV DCTTNPTIVL KALGTDMFAD AFEEAIKWGK 
AKGGASDAVT EAIADRLAIS VGAALAKIVP GRVSTEVDAD LSFDTQASLN KARAIIAQYK
ERGIEKDRIL IKLASTWEGI RAAEVLQKEG IDCNLTLLFS KAQAIACAEA KVFLISPFVG
RILDWYKKST GENYTSETDP GVVSVRQIYN FYKVNGIETI VMGASFRNAG EIEALAGCDR
LTISPALLDE LDAATGDLPR VLSPEKTTPD PLVSLDEKAF RWALNEDAMA TEKLSEGIRA
FAKDLGTLRG MVAKKLAA