| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3833 |
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| Symbol | xylB |
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| ID | 7388524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3184400 |
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| End bp | 3185869 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643652591 |
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| Product | xylulokinase |
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| Protein accession | YP_002550772 |
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| Protein GI | 222149815 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | [TIGR01312] D-xylulose kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.967873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCTCG GATTGGATCT CGGCACGTCG GGCGTCAAGG CGATGTTGAT CGACGCGGAC
CAGACGGTGA TTGGCTCGGC CAATGGCGCG CTAACCGTCT CGCGCCCGCA TTCCGGCTGG
TCGGAACAGG CGCCGGCGGA TTGGATCAGG GCGACACAGG AGGCGATTGC CGGGCTGAAA
GCACAGTTTT CCCGCGAGCT TTCTGCCGTC AAAGGCATTG GTCTTTCCGG CCATATGCAT
GGCGCAACAT TGATCGATGC GCAGGGTGAC GTCTTGCGGC CCTGCATTCT GTGGAACGAC
ACCCGCTCCT TCAAACAAGC CGCAGCACTG GATGCCGATC CGCGTTTTCG CGCGCTGACC
GGCAATATCG TCTTTCCAGG CTTTACCGCG CCGAAGCTGG CTTGGGTGAA GGAGAATGAG
CCTGACATCT TCGCCAAAGT TGCCAAGGTA TTGCTGCCCA AGGATTATCT GCGGCTCTGG
CTGACGGGTG AATATCTGTC GGAGATGTCG GATTCGGCCG GTACCTCCTG GCTCGATACC
GGCAAGCGCG CCTGGTCGAG CGCGCTTCTC GCCGCCACCG ATCTCGGCGA GCAGCACATG
CCCGGATTGG TCGAAGGCAC TGCCGAGGCG GGCCGGTTGC GCGCCGAGCT GGCGGCTGAT
TGGGGCATGG GTGCCGGTGT CATCGTTGCC GGCGGGGCGG GGGACAACGC GGCCTCTGCT
TGCGGCATGG GCACGGTGGC GGAAGGCCAT GCCTTCGTGT CGCTTGGCAC ATCCGGGGTG
TTGTTTGCCG CCAATGCCTC CTATCTGCCA AAGCCGGAAA GCGCCGTGCA TGCCTTTTGC
CACGCGCTTC CCAATACCTG GCACCAGATG GGCGTGATCC TGTCGGCCAC GGACGCGCTG
AACTGGTATT CCGGTGTCAG CGGCAAGCCT GCCGGAGACC TGACACATGA GCTTGGTGAG
GACCTCAAGG CCCCGACTGG CGTCACCTTC CTGCCTTATC TCTCGGGCGA GCGCACGCCC
CATAACGATG CCGAAATCCG GGGCGCGTTC ATTGGTCTCG GCCACGAATC CAGCCGCGCT
GTTCTGACCC AGGCCGTGCT GGAAGGCGTG TCCTTCGCCA TCAGGGACAG TCTTGAAGCG
CTGAAGTCGG CGGGAACGTC ACTGTCACGG GTCACCGCGA TTGGCGGCGG CTCGCGCTCG
CGCTACTGGC TGGCGTCGAT TGCCACCACG CTTGGCATTC CCGTCGATAT TCCAGCCGAT
GGTGACTTTG GGGCTGCCTT TGGTGCTGCC CGCCTGGGGT TGATTGCCGC AACCGGTGCC
GATCCGCTCG CCGTTTGCTC AGCCCCGCCG ACGGAGGCAA CCATTGAGCC CGTGACGGCT
TTGCGCGACG GCTACGAGGA CGCTTATCAG CGCTACCGCG CGCTCTATCC GGCCATCAAG
CAATTGGGTC CCATCACGCT GGCCCATTGA
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| Protein sequence | MYLGLDLGTS GVKAMLIDAD QTVIGSANGA LTVSRPHSGW SEQAPADWIR ATQEAIAGLK
AQFSRELSAV KGIGLSGHMH GATLIDAQGD VLRPCILWND TRSFKQAAAL DADPRFRALT
GNIVFPGFTA PKLAWVKENE PDIFAKVAKV LLPKDYLRLW LTGEYLSEMS DSAGTSWLDT
GKRAWSSALL AATDLGEQHM PGLVEGTAEA GRLRAELAAD WGMGAGVIVA GGAGDNAASA
CGMGTVAEGH AFVSLGTSGV LFAANASYLP KPESAVHAFC HALPNTWHQM GVILSATDAL
NWYSGVSGKP AGDLTHELGE DLKAPTGVTF LPYLSGERTP HNDAEIRGAF IGLGHESSRA
VLTQAVLEGV SFAIRDSLEA LKSAGTSLSR VTAIGGGSRS RYWLASIATT LGIPVDIPAD
GDFGAAFGAA RLGLIAATGA DPLAVCSAPP TEATIEPVTA LRDGYEDAYQ RYRALYPAIK
QLGPITLAH
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