| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3791 |
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| Symbol | |
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| ID | 7388244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3152651 |
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| End bp | 3153610 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652560 |
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| Product | dehydrogenase |
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| Protein accession | YP_002550741 |
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| Protein GI | 222149784 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAATA AGCCCGTAAT TCTCATTCCC GGAAAAATTC ATCCGCGCGT GTTGGAACGT
TTGCAGCCTG GTTTCGAACT GGTGCAGACC CCGCCCGGCC AGCCGGTTGC GTTAAACGAT
GCTGACGCCG CCCGCGTGCG GGGCATTGCC ATTGCCGGTG CTGTGCCGGG CGCCTTGATC
GACAGCCTGC CGAAGCTGGA AATCATTGCC AATTTCGGCG TCGGCTATGA CGGGGTGGAT
GTGGCAAAAG CTGCGTCTAA AAATGTTATC GTTACCAACA CGCCTGACGT GCTGGATGAT
GAAGTGGCCG ATACGACGAT TGCGCTGCTG CTCAACACGA TCAGGCAGTT CCATCAGGCG
GAAAGCTATC TGCGGGCCGG GCGCTGGCAG AACGAGGGAC CGTTTACACT GTCGCCGCTG
TCGCTGCGGG GCCGCCATGT CGGGCTTTAT GGATTGGGGC GGATCGGTGG TGAAATCGCC
AGCCGGTTAC AACCCTTCAA GGTGAAGATC AGCTACCATA CCCGCAGCCC CAAGCCCGGC
GTTCCCTACG ATTACCATGC CTCGCTGACG GATCTGGCCG CAGCCGTCGA TACGCTGATC
TGCATTGTGC CGAAAACGCC GGAAACCCAC AAGGCGATCA ATGCCGACGT GTTGAAGGCG
CTGGGGCCGA ACGGCGTGTT CATCAGCGTC GGCCGTGGCT GGAGCGTCGA TGAACCGGCG
CTGATCTCAG CCTTGAAGGA TGGCACGATT GCCGCCGCCG GAATGGACGT GTTCTACGAA
GAACCGAAAG TACCGGCGGA ATTCCTCGAT CTGCCCAATG TGTCGCTGTT GCCGCATGTC
GCCTCCGCCT CGGTGCCGAC CCGCAATGCC ATGGCCGATC TGGTGGCGGA TAACCTGATC
GGCTGGTTTG AAAACGGTAT GGTCAAGACA CCCGTGCCGG AAACACCAGT GAAGCGGTAA
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| Protein sequence | MTNKPVILIP GKIHPRVLER LQPGFELVQT PPGQPVALND ADAARVRGIA IAGAVPGALI
DSLPKLEIIA NFGVGYDGVD VAKAASKNVI VTNTPDVLDD EVADTTIALL LNTIRQFHQA
ESYLRAGRWQ NEGPFTLSPL SLRGRHVGLY GLGRIGGEIA SRLQPFKVKI SYHTRSPKPG
VPYDYHASLT DLAAAVDTLI CIVPKTPETH KAINADVLKA LGPNGVFISV GRGWSVDEPA
LISALKDGTI AAAGMDVFYE EPKVPAEFLD LPNVSLLPHV ASASVPTRNA MADLVADNLI
GWFENGMVKT PVPETPVKR
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