| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3776 |
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| Symbol | soxD |
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| ID | 7388229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3141916 |
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| End bp | 3142236 |
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| Gene Length | 321 bp |
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| Protein Length | 106 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643652546 |
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| Product | sarcosine oxidase delta subunit |
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| Protein accession | YP_002550727 |
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| Protein GI | 222149770 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4311] Sarcosine oxidase delta subunit |
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| TIGRFAM ID | [TIGR01374] sarcosine oxidase, delta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTTGA TCAAATGTCC CTATTGTCAG GAAGAGCGGT CCGAGCTGGA ATTTCACGGC
GCAGGCGAGG CGCATATTGT GCGGCCAGCC AATATTGCCG AGATTTCTGA TGAGGAATTC
GAAGCCTTCT TTTTCTTACG CGATAACCCC AAGGGCATCA TCTTTGAGCG CTGGCGGCAC
CTGCATGGCT GCGGGCGGTT TTTCAATGCC GTGCGCGATA CCGTCAGCGA CAAGTTTTTG
CTGACCTATA AGGCAGGTGA AGCCAAGCCG GATGATGCAG CCGTGCAAGC CCTCATCGAC
AACAAGGGAG CTGCGCAATG A
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| Protein sequence | MLLIKCPYCQ EERSELEFHG AGEAHIVRPA NIAEISDEEF EAFFFLRDNP KGIIFERWRH
LHGCGRFFNA VRDTVSDKFL LTYKAGEAKP DDAAVQALID NKGAAQ
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