| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3762 |
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| Symbol | glgA |
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| ID | 7388219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3128499 |
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| End bp | 3129935 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652535 |
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| Product | glycogen synthase |
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| Protein accession | YP_002550716 |
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| Protein GI | 222149759 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0297] Glycogen synthase |
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| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCC TGTCCGTTGC ATCGGAAGTC TATCCGCTGA TCAAGACCGG CGGTCTCGCC
GATGTGGCGG GCGCCCTGCC CCTGGCGCTC GAACCCTTGG GCATAAAAAC CAGAACCCTG
CTGCCGGGCT ATCCGGCAGT CCTCGCCAAG CTCGGTAACA TGGATGTGCT GCTGCATATG
CCTGATCTTC TAGGCGAGCC TGCAACCGTG CTTTCGGCTC GGCATGAGGG CTTGGACCTG
CTGATCCTCG ATGCGCCAAC GCTCTACAAT CGGCCAGGCG GCCCTTACGT CGATAGCGAT
GGTCGTGATT TCGCCGATAA CTGGAAACGG TTCGCGGCGC TGTCGCTGGC AGGTGCCCGC
ATTGCCCAAG GTGCGCTGGA TGATTGGCGG CCCGATCTCG TCCATGTCCA CGACTGGCAG
GCCGCCCTGG TGCCTGTTTA TATGCGCTAT GATGAGAAGC CGGAAATTCC GAGCCTCATC
ACCATTCACA ACATCGCCTT TCAGGGGCAA TTTTCCAATG ACATCCTCCC GGCTCTCGGT
CTGCCGGACC ATGCGCTGTG GGAAGCGCTC GAATATTACG GCACGCTGGC TTTTCTGAAA
GGCGGCATTG CCACGGCCCA CGCCATCAGC ACGGTCAGCC CGTCTTATGC TGAGGAAATT
CTCGATCCGC ATTTCGGCAT GGGCATGGAA GGGCTGATCG CCAGCCGCGC CAATGACCTG
TTCGGCATCG TCAACGGCAT CGATACCGCC GTCTGGAACC CCGATGGGGA CGGGCTGATC
GCCTCCCCTT ATAGCGCAGC TGCCCTGCGC AAGCGGGTCG CCAATCGCGA AGCACTCACC
CGGCATTTCG GCCTCGACGA TGATGCGGCA CCGATTTTCT GCGTGATTTC CCGCCTCACC
TGGCAAAAGG GGATGGACGT GCTGGCCGAA GTCGCCGACG ATCTCGTCGC AGCCGGCGGC
AAGCTGGTCA TTCTCGGCTC CGGTGATCCG GCCCTGGAAG AGGCCTTGCA GGCGGCGGCC
AGCCGTCATC CGGGCCGGAT CGGCATGGTG ATGGGCTATA ACGAACCGCT GTCGCATCTG
ATGCAGGCGG GTGCCGATGC CATCCTCATT CCATCGCGAT TTGAACCTTG CGGCTTGACC
CAGCTTTACG GCCTGCGCTA CGGCTGTGTT CCGGTGGTGA GCCGCACCGG TGGTTTGAAT
GACACGGTCA TCGACGCCAA TGCGGCAGCA CTTGCGGCAA AGGCTGCCAC CGGCATACAG
TTCGCCCCGG TCACGGTGGC GGGTTTGCGA CAGGCGGTAC GCCGGGCAAT CCGCCTCTTC
GACGACAAGA AACTATGGTA TCAGATCCAG AAGCAGGGCA TGAAAGCAGA CGTATCCTGG
ACAGCAAGCG CCCAGCGCTA CGTCGATGTT TATAACCGCC TCCTCGGAAA AGGCTGA
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| Protein sequence | MNILSVASEV YPLIKTGGLA DVAGALPLAL EPLGIKTRTL LPGYPAVLAK LGNMDVLLHM
PDLLGEPATV LSARHEGLDL LILDAPTLYN RPGGPYVDSD GRDFADNWKR FAALSLAGAR
IAQGALDDWR PDLVHVHDWQ AALVPVYMRY DEKPEIPSLI TIHNIAFQGQ FSNDILPALG
LPDHALWEAL EYYGTLAFLK GGIATAHAIS TVSPSYAEEI LDPHFGMGME GLIASRANDL
FGIVNGIDTA VWNPDGDGLI ASPYSAAALR KRVANREALT RHFGLDDDAA PIFCVISRLT
WQKGMDVLAE VADDLVAAGG KLVILGSGDP ALEEALQAAA SRHPGRIGMV MGYNEPLSHL
MQAGADAILI PSRFEPCGLT QLYGLRYGCV PVVSRTGGLN DTVIDANAAA LAAKAATGIQ
FAPVTVAGLR QAVRRAIRLF DDKKLWYQIQ KQGMKADVSW TASAQRYVDV YNRLLGKG
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