| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3752 |
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| Symbol | |
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| ID | 7388211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3113434 |
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| End bp | 3116778 |
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| Gene Length | 3345 bp |
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| Protein Length | 1114 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652527 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550708 |
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| Protein GI | 222149751 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases
[COG4196] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.139209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATCA AGGCAAGCAT TTATCATCTC ACCCATTATA AATATGACAC GCCGATCCGC
CTGGGGCCGC AGATCATTCG CCTGAAACCG GCGGCCCATT CCAGAACAAA GGTTCTGAGC
CACTCCCTCA AGGTCACGCC CGAAAATCAC TTCGTCAATC TCCAGCAGGA CCCCTACGGC
AACTATCTGG CCCGTTTCGT GTTTCCCGAT CCGGTCACCG AGTTCAAGAT CGAAGTCGAT
CTCACCGCCG ATATGAGCAT CTACAATCCC TTCGATTTCT TCACGGAGGA AGAGGCCGTT
ACCTGGCCGT TCGAATACCC GGAGGATATC CGCGAGGATC TGGCGATCTA CAAAAAACCG
GAGCCGGACA GCCCCGCCCT CGATTCCTAT CTCAAGACCC TGGACATGAC GCCGGGCCAA
GGCACGGTCG ATATGATCGT CGCGCTCAAT GCCCGCCTGC AAAGCGAAAT CGGCTATGTC
ATCCGCCTGG AGCCGGGCGT GCAGACACCG GATGAAACGC TGACCTCGGC GCGTGGCTCC
TGCCGAGATA CCAGCTGGCT GCTGGTGCAG ATTCTCCGGC ATCTGGGCAT TGCCGCCCGC
TTCGTCTCCG GCTATCTGAT CCAGCTGAAG CCGGATCTGG AAGCGCTGGA TGGCCCCTCC
GGCACCAAGG TGGATTTCAC CGACCTGCAT GCCTGGGCGG AAGCCTATAT TCCCGGCGCC
GGCTGGATCG GCCTGGACCC GACCTCCGGC CTGATGACCG GCGAAAGCCA TATTCCACTG
GCCGCCACAC CGCATTACAA AAACGCCGCC CCGATTTCCG GCGGCTATTT CGGGCAAGCC
AAGACCGATT TCGACTTTGA TATGAAGGTG ACACGGGTTG CCGAGCATCC GCGCATCACC
AAGCCGTTTT CCGATGAAAG CTGGGAAGCA CTGAACGCGC TTGGCCTGAA GGTCGATGGC
GATCTGAAGG CCCATGACGT GCGCCTGACC ATGGGCGGCG AACCGACCTT CGTGTCGATC
GACGATTTCC AGTCGGCGGA ATGGAATACC GATGCGGTTG GCCCGACCAA GCGGGCGCTG
GCCGATCAGT TGATCCGCAA GCTGCGTACC CGCTTTGCCC CCGGCGGCTT CCTGCATTAC
GGGCAGGGTA AATGGTATCC GGGTGAAAGC CTGCCACGCT GGACCTTCTC GCTCTACTGG
CGCAAGGACG GCAAGCCGAT CTGGCATAAT CCGGACCTGA TTGCCACGGA GACAGCCGAT
ACCAATGTGA GCCATGAGCA GGCCCAGGCG CTGATGGCCG GCATTGCCAC CGAGCTGGAG
ATCGAGCCTG ACATGATCCT CCCGGCCTAT GAAGATCCCG CAGCCTGGAT CATCAAGGAA
GGCAGCCTGC CGGAAAATGT CGATCCGTCC AATTCCAAGC TGGAAAGCCC CGAAGAGCGC
GCCCGCATCG CCAAGGTGTT CGAGCGCGGC TTGACGATCC CGACCGGCTA TATCCTGCCG
GTCCAGGCCT GGAACGCCAA GGCCAGCGGT CGGCGCTGGA TCAGCGAGAA ATGGCGCACC
CGGCGCGGCA AGATCTTCCT GATTCCAGGC GACAGTCCCG TTGGCTTTCG CATGCCGCTC
GGCACCCTGC CCTATGTGCC ACCCTCGCAA TATCCCTATA TTCACACGGC GGACCCATCC
ATCCCACGCA CACCGCTGCC GGATTTCGGC CCGGATGCCC GCGAAGGCCG GGCGCTGTCG
GAAGCCTCGC GCAAAACCAG CGACGCCCAG CAGGACCGCA ACGAACAGAA TATTGCCGGC
TCAACCGGTG ACATAACCGG CGCCGTGCGC ACCGCCATGA GCGTCGAGCC GCGTGATGGC
CGGCTCTGCG TGTTCATGCC GCCGGTGGAG CGGATCGAGG ACTATCTGGA ACTGGTAGCC
GCCGCCGAGA CCGCTGCGCA CAATCTCGGC CTGCCGATCC ACATCGAAGG CTATGCCCCA
CCGCAAGACG AGCGCATCAA TGTCATCCGC GTCGCCCCCG ATCCTGGGGT TATCGAGGTC
AACATCCACC CCGCCGATAG CTGGCAGGAT TGCGTGGCCA CCACCGATAT CATCTATGAA
GAGGCCCGCC AGACGCGGCT TGGCGCCGAT AAGTTCATGA TCGATGGCCG CCATACCGGC
ACCGGCGGCG GCAACCATGT GGTGGTTGGC GGCGCCAATC CCGGCGACAG CCCGTTCCTG
CGCCGCCCGG ATCTGCTGAA AAGCCTGGTC CTGCATTGGC AGCGCCATCC GGCTTTGTCC
TATATGTTCT CGGGCATGTT TATCGGCCCG ACCAGCCAGG CGCCACGCTT TGACGAGGCC
CGCCATGATA CGCTCTATGA GCTGGAAATT GCGCTGGCCC AGATCCCCAT GCCAGACAGT
GGCGCGGCCC CGCCTTTGCC CTGGCTGGTC GACCGGCTAT TTCGCAACCT GCTGACCGAT
GTCACCGGCA ATACGCATCG CTCGGAAATC TGCATCGACA AGCTGTTTTC GCCTGACGGT
CCAACGGGGC GGCTGGGTCT GGTTGAATTC CGTGGCTTTG AAATGCCACC GAATGCCCGC
ATGTCGCTGG CCCAGCAATT GCTGGTGCGG GCGCTGATCG CCAGGTTCTG GAAGAACCCG
ATCGGTGGAA ATTTCGTGCG CTGGGGCACG GCATTGCACG ACCGCTTCAT GCTGCCGCAT
TATCTCTGGC AGGATTTTCT CGAAGTGTTG TCAGACCTGC GCGAACACGG CTTCGACTTC
AAGCCGGAAT GGTTTGCCGC CCAGCTGGAA TTCCGCTTCC CCTTCGTCGG ACAGGTAGAA
TACGAAGACA GCAAACTGGA GCTGCGCCAG GCGCTGGAGC CCTGGCATGT GATGGGCGAG
GAAGGTGCCA TCGGCGGTAC GGTGCGCTAT GTCGATAGTT CCGTTGAGCG TTTACAGGTC
AAGCTGGAGA CCGCCAATCC CGAGCGCTAC ACCATTGCCT GCAATGGCCG CCGTCTGCCG
CTGAAGAAAA GCGGCACAAA TGGCGTGGCC GTCGCCGGTG TTCGCTACAA GGCCTGGCAA
CCGGCATCAG GCCTGCATCC GGTCCTGCCT GTAAACACAC CGCTAACATT CGACGTTTAT
GATATATGGA CAGGGCGGTC GATCGGTGGT TGTGTGTATC ATGTCGCGCA TCCCGGTGGT
CGCAGTTATG ATACTTTCCC TGTGAATGGC AATGAAGCGG AGGCTAGGCG GCTTGCGCGG
TTCGAACCCT GGGGCCATAC AGCCGGATCG TATCCGCTGT GGCCGGAAGC CGTCTCGCCG
GAATTTCCGC ACACATTGGA TTTGCGGCGA CCACATGGGA TCTAA
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| Protein sequence | MAIKASIYHL THYKYDTPIR LGPQIIRLKP AAHSRTKVLS HSLKVTPENH FVNLQQDPYG
NYLARFVFPD PVTEFKIEVD LTADMSIYNP FDFFTEEEAV TWPFEYPEDI REDLAIYKKP
EPDSPALDSY LKTLDMTPGQ GTVDMIVALN ARLQSEIGYV IRLEPGVQTP DETLTSARGS
CRDTSWLLVQ ILRHLGIAAR FVSGYLIQLK PDLEALDGPS GTKVDFTDLH AWAEAYIPGA
GWIGLDPTSG LMTGESHIPL AATPHYKNAA PISGGYFGQA KTDFDFDMKV TRVAEHPRIT
KPFSDESWEA LNALGLKVDG DLKAHDVRLT MGGEPTFVSI DDFQSAEWNT DAVGPTKRAL
ADQLIRKLRT RFAPGGFLHY GQGKWYPGES LPRWTFSLYW RKDGKPIWHN PDLIATETAD
TNVSHEQAQA LMAGIATELE IEPDMILPAY EDPAAWIIKE GSLPENVDPS NSKLESPEER
ARIAKVFERG LTIPTGYILP VQAWNAKASG RRWISEKWRT RRGKIFLIPG DSPVGFRMPL
GTLPYVPPSQ YPYIHTADPS IPRTPLPDFG PDAREGRALS EASRKTSDAQ QDRNEQNIAG
STGDITGAVR TAMSVEPRDG RLCVFMPPVE RIEDYLELVA AAETAAHNLG LPIHIEGYAP
PQDERINVIR VAPDPGVIEV NIHPADSWQD CVATTDIIYE EARQTRLGAD KFMIDGRHTG
TGGGNHVVVG GANPGDSPFL RRPDLLKSLV LHWQRHPALS YMFSGMFIGP TSQAPRFDEA
RHDTLYELEI ALAQIPMPDS GAAPPLPWLV DRLFRNLLTD VTGNTHRSEI CIDKLFSPDG
PTGRLGLVEF RGFEMPPNAR MSLAQQLLVR ALIARFWKNP IGGNFVRWGT ALHDRFMLPH
YLWQDFLEVL SDLREHGFDF KPEWFAAQLE FRFPFVGQVE YEDSKLELRQ ALEPWHVMGE
EGAIGGTVRY VDSSVERLQV KLETANPERY TIACNGRRLP LKKSGTNGVA VAGVRYKAWQ
PASGLHPVLP VNTPLTFDVY DIWTGRSIGG CVYHVAHPGG RSYDTFPVNG NEAEARRLAR
FEPWGHTAGS YPLWPEAVSP EFPHTLDLRR PHGI
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