Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3739 |
Symbol | ibpA |
ID | 7388203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3103857 |
End bp | 3104324 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643652518 |
Product | small heat shock protein |
Protein accession | YP_002550700 |
Protein GI | 222149743 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTCACG TTGATTTTTC CCCGCTCTAT CGCTCCACCG TCGGCTTCGA CCGCCTGTTC ACCATGTTGG ACAGCCTGGG TCAGCCGGAT CAGGCCCAGA GCTATCCGCC CTATAATATC GAGCGGACGG GCGACAATAC CTACCGGATC ACCATGGCCG TTGCCGGCTT CGATGAAACC GAACTCAGCA TCGAGGCCCA TGCGCATGTG CTGGCGGTCA AGGGTGAGAA AGCCCAGGAA GACCAGGCCG AACAGACCGA GTTTCTGTAT CGCGGCATTG CCAAGCGCGG GTTCGAGCGT CGTTTCCAGC TTGCCGACCA TGTCGAGGTG ACCAATGCCT CGCTGAAGAA CGGCCTGCTG CATATCGATC TGCTGCGCAA TATTCCCGAA GCCATGAAGC CGCGCCGCAT CGCCATTGCC AGCGAACCGG TCGAGGCGCC CAAGGCGATT GAGTCTCGCG TCGTCTGA
|
Protein sequence | MRHVDFSPLY RSTVGFDRLF TMLDSLGQPD QAQSYPPYNI ERTGDNTYRI TMAVAGFDET ELSIEAHAHV LAVKGEKAQE DQAEQTEFLY RGIAKRGFER RFQLADHVEV TNASLKNGLL HIDLLRNIPE AMKPRRIAIA SEPVEAPKAI ESRVV
|
| |