| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3734 |
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| Symbol | gltB |
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| ID | 7388201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3097290 |
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| End bp | 3102011 |
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| Gene Length | 4722 bp |
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| Protein Length | 1573 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652516 |
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| Product | glutamate synthase large subunit |
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| Protein accession | YP_002550698 |
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| Protein GI | 222149741 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAGA TGATGCCATC CGAAGCAATC GTGGCGGCCG ATGCGACGCA GGCGACAGCC
GGTGCCGGTA CGCTAAAGCG TTATGGTCTT CCGCAAAAGC AGGGCCTCTA CGATCCGCGC
AACGAGCATG ATGCCTGCGG CGTCGGCTTT ATCGCCCATA TGAAGGGCGA GAAGTCGCAC
CAGATCGTCC GCGACGGCCT GTTCATTCTT GAAAACCTCA CTCATCGCGG CGCGGTCGGC
GCTGACCCGC TGATGGGAGA CGGCGCTGGT ATTCTGGTGC AGATCCCCGA CCGGTTTTTC
CGCGAAGAGA TGGCTGCCCA GGGCGTCATT CTGCCCAAGG CTGGTGAATA TGCCGTCGGA
CATTTCTTCT TCCCCGCCGA TGAAGAGCAG ATTGCCCATT TCAAGAAGGT GATCACCGAT
GTCTGTCTGA CCGAGGGCCA GCACCTGCTT GGCTACCGCG ACGTGCCGGT CGATAATTCC
TCGCTGTCCA AGGCCCCGGA TATTGCTGCA ACTGAGCCGC GCCAGATTCA GGTGTTCATC
GGTGCTGGCC GCGATGCCGC CACGCAGGAC GCTTTTGAAC GTCGCCTGTT CTTGCTGCGC
AAGGTGATTT CCAACCGGAT TTATGACGAG TTTGGCGGCC AGGAAACCGG CTTCTATCCG
GTGTCGCTGT CGTCTTCGAC CATCGTCTAC AAGGGCATGT TCCTCGCCTA TCAGGTGGCT
GCTTATTATA AGGATCTCGC CGATCCGCGA TTTGAATCGG CTGTGGCCCT GGTGCATCAG
CGCTTTTCTA CCAACACATT CCCGTCGTGG AAGCTGGCGC ATCCCTACCG GATGGTCGCC
CATAACGGCG AAATCAACAC GCTGCGCGGC AATGTCAACT GGATGGCGGC CCGGCAGGCC
TCTGTATCCT CGCCGCTGTT TGGCGATGAC ATTTCCAAGC TCTGGCCGAT TTCCTATGAA
GGCCAGTCGG ATACCGCCTG TTTCGACAAT GCGCTCGAAT TCCTGATCCG TGGCGGCTAT
TCCATGGCCC ATGCGGTGAT GATGCTGATC CCGGAAGCCT GGGCTGGCAA TCAGTTGATG
AGCAAGGAGC GCAAGGCGTT TTACGAATAC CATGCAGCCC TGATGGAGCC ATGGGACGGC
CCTGCCGCCG TGGCCTTCAC GGATGGCCGC CAGATCGGCG CGACGCTGGA CCGCAACGGG
TTGCGTCCAG CCCGCTACCT GGTGACGGAT GACGACCGGA TCATCATGGC GTCGGAGGCT
GGCACGCTGC CGGTGCCTGA AGAGAAGATC GTCAAGAAGT GGCGTTTGCA GCCGGGCAAG
ATGCTGCTGA TCGACATGGA AAAGGGCCGG ATCGTTTCCG ATGAGGAGGT CAAGTCGGAT
CTGGCTGGCA GCCTTCCCTA CCGGGAATGG CTGGATCGTA CCCAGTTGAT CCTCGAGGAT
CTGAAGCCGG TTGAGCCACG GGCGCTGCGC CGCGATGTGT CGCTGCTCGA CCGCCAGCAG
GCTTTCGGCT ACACGCTGGA AGACACCCGC ATCCTGATGT CGCCAATGGC GACCACCGGT
CAGGAAGCCA TCGGCTCGAT GGGCACCGAC ACGCCGATTT CGGCGATGTC GTCGAAGTCG
AAGCTGCTTT ATACCTATTT CAAGCAGAAT TTTGCCCAGG TCACCAACCC GCCGATCGAT
CCGATCCGCG AGGAGCTGGT GATGAGCCTG GTGTCCTTCA TCGGCCCGCG CCCCAACATT
CTCGATCATG AGGGGGCGGC CCGCGCCAAG CGGCTGGAAG TGCGCCAGCC GATCCTGACC
AATGGCGATC TCGAAAAGAT CCGCTCCATC GGCCATACCG AGGACCGCTT CGATACCAAG
ACGCTCGACT TCACCTATGA TGTGGAGCGT GGCGCCGAAG GCATGCCCGA AATGCTCGAC
CGGCTCTGCG AGCGTGCCGA AGCTGCGGTG CGCGGCGGCT ATAACATCAT CGTGTTGTCG
GACCGGCAAA TCGGCCCGGA TCGCATCGCC ATTCCAGCGC TGCTGGCCAC GGCTGCTGTG
CATCATCACC TGATCCGCAA GGGCTTGCGC ACCTCGGTCG GCCTGGTCGT CGAGACCGGC
GAACCGCGCG AAGTGCATCA TTTCTGCTGT CTGGCGGGCT ATGGCGCGGA AGCCATCAAC
CCCTATCTGG CCTTCGACAC ACTGCTGGAC ATGCACAAGC ATGGCGAATT CCCCAGGGAA
GTCGATGCCA GCGAAGTGGT CTATCGCTAT ATCAAGGCGG TCGGTAAGGG CATTCTCAAG
GTGATGTCCA AGATGGGCAT TTCCACTTAC CAGTCCTATT GCGGCGCGCA GATTTTCGAT
GCCATCGGGT TGAATTCGCA GCTGATCGAT CAGTATTTCT TCGGCACAGC CTCCAACATT
GAAGGCATTG GCCTTGCCGA GATTGCCCAG GAAACCGTGG CGCGCCATCA TTCCGCCTTC
GGCAAGGACC CGATCCTGGC GACCTCGCTG GATATCGGCG GCGAATATGC CTACCGCCTG
CGCGGTGAAA ACCATGCCTG GAGCCCGGAT TCGATTGCCT CGCTGCAACA TGCCGTGCGT
GGCAATTCGC AGGAGCGCTA CCGCGAATTC GCGGCAATGG TCAATGAAAG CGCCTTGCGG
ATGAACAGCA TTCGCGGTCT GTTCAAGATC AAGAAGGCCA CCGATCAGGG GCGCCAGCCG
ATTTCGGTTG ATGAGGTCGA GCCGGCGGCT GACATCGTCA AGCGCTTCTC CACGGGCGCT
ATGTCATTCG GCTCGATCAG CCGCGAAGCG CACACGACGC TGGCCATCGC CATGAACCGG
ATTGGCGGCA AGTCCAACAC CGGTGAGGGC GGCGAAGAAA GCGACCGTTA CCTGCCCCTG
TTCAACGGGT CGCCCAACCC GGAACGATCC GCCATCAAGC AGATCGCCTC TGGCCGGTTC
GGCGTGACCA CCGAATATCT CGTCAATGCC GATATGCTGC AAATCAAGGT GGCGCAGGGT
GCCAAGCCCG GCGAGGGCGG ACAATTGCCC GGCCACAAGG TGGATGCGAC CGTTGCCAAG
ACCCGGCATT CAACGCCGGG CGTCGGCCTG ATTTCGCCGC CGCCGCATCA CGACATCTAC
TCCATCGAAG ATCTGGCGCA GCTGATCTAC GATCTGAAGA ACGTCAACCC GGCAGCCGAT
GTTTCGGTCA AGCTGGTGTC GGAAGTCGGC GTCGGCACGG TGGCCGCAGG CGTTGCCAAG
GCCCGTGCCG ACCATATCAC CGTGTCCGGC TTTGATGGCG GCACGGGTGC CTCGCCCTTG
ACCTCGCTGA AACACGCGGG CAGCCCTTGG GAAATCGGCC TGGCCGAAAC CCAGCAGACG
CTGGTCATGA ACGGTCTTCG CTCGCGCGTT GCTTTGCAGG TTGATGGTGG TCTGAAGACC
GGTCGTGACG TCATTATTGG CGCATTGCTC GGCGCTGACG AATTCGGTTT TGCCACCGCA
CCGCTGATTG CCGCAGGCTG CATCATGATG CGCAAGTGCC ATCTCAACAC CTGCCCGGTT
GGCGTCGCCA CCCAGGACCC GGTTTTGCGC AAGCGCTTCA AGGGTACGCC GGAACATGTC
ATCAACTACT TCTTCTTTGT CGCGGAAGAA GTGCGCGAAA TCCTCGCCTC GCTGGGCTTT
GCCAAGCTGG ATGACATTAT CGGTGCCTCG GAACTTCTGG AAAAGAATGA CATGCTGGCC
CATTGGAAGG CCGAGGGTCT CGACTTCTCG AAGATCTTCC ACAAGGTCGA AGCGCCCAAG
GAAGCCACCT ACTGGACGGA GCGCCAGCAT CATCCGATCG AAGATGTGCT GGACCGCCGG
TTGATCGAAA AGTCGATGCC CGCGCTGGAA AGCAAACAGC CCGTGGTGTT CGAGGTCGAT
ATCAAGAATG TGGATCGCTC AGCCGGTGCC ATGCTGTCGG GTGAACTTGC CAAGCGCTGG
GGCCACAAGG GTTTGAAGGA CGACACTGTT CATGTGACGC TGAACGGCAC GGCAGGCCAG
TCCTTCGGGG CGTTTCTGTC GCGCGGCATC ACCTTCGATC TGGTCGGTGA CGGCAATGAC
TATGTCGGCA AGGGGCTATC CGGTGGCCGG ATCATCGTGC GTCCGCCGGA AAACTCGAGG
ATTGCCGCCG AACACTCGAT CATTGTCGGC AATACCGTGC TTTACGGTGC CATTGCCGGG
GAATGCTATT TCCGCGGCGT GGCGGGCGAA CGGTTCGCGG TGCGCAATTC CGGCGCGATT
GCGGTTGTCG AAGGCGTGGG TGACCACGGC TGCGAATACA TGACGGGCGG CGTGGTTGTG
GTGCTGGGCG AAACCGGCCG CAACTTTGCA GCCGGCATGT CCGGCGGTGT GGCTTACGTC
CTTGATGAAA AGGGCGATTT CGCCAAGCGC TGCAACATGG CGATGGTGGA ACTGGAACCG
GTGCCGGAAG AAGATGACAT GCTGGAAAAG CTGCATCACC ACGGCGGCGA CTTGATGCAT
AAGGGTCTGG TGGACGTGTC GGAAGACATG ACCCGCCATG ACGAGGAGCG GCTCTATCAG
CTGATCTCCA ACCATCTGCA TTATACGGGC TCGAACCGCG CGAAGCAGAT CCTCGACAAC
TGGGCCGATT ACCGTCCGAA ATTCCGCAAG GTCATGCCGG TCGAATATCG CCGGGCGCTG
GAGGAAATGG AACGGATGCG CATGGGCGTT GCCGCCGAAT AG
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| Protein sequence | MTQMMPSEAI VAADATQATA GAGTLKRYGL PQKQGLYDPR NEHDACGVGF IAHMKGEKSH
QIVRDGLFIL ENLTHRGAVG ADPLMGDGAG ILVQIPDRFF REEMAAQGVI LPKAGEYAVG
HFFFPADEEQ IAHFKKVITD VCLTEGQHLL GYRDVPVDNS SLSKAPDIAA TEPRQIQVFI
GAGRDAATQD AFERRLFLLR KVISNRIYDE FGGQETGFYP VSLSSSTIVY KGMFLAYQVA
AYYKDLADPR FESAVALVHQ RFSTNTFPSW KLAHPYRMVA HNGEINTLRG NVNWMAARQA
SVSSPLFGDD ISKLWPISYE GQSDTACFDN ALEFLIRGGY SMAHAVMMLI PEAWAGNQLM
SKERKAFYEY HAALMEPWDG PAAVAFTDGR QIGATLDRNG LRPARYLVTD DDRIIMASEA
GTLPVPEEKI VKKWRLQPGK MLLIDMEKGR IVSDEEVKSD LAGSLPYREW LDRTQLILED
LKPVEPRALR RDVSLLDRQQ AFGYTLEDTR ILMSPMATTG QEAIGSMGTD TPISAMSSKS
KLLYTYFKQN FAQVTNPPID PIREELVMSL VSFIGPRPNI LDHEGAARAK RLEVRQPILT
NGDLEKIRSI GHTEDRFDTK TLDFTYDVER GAEGMPEMLD RLCERAEAAV RGGYNIIVLS
DRQIGPDRIA IPALLATAAV HHHLIRKGLR TSVGLVVETG EPREVHHFCC LAGYGAEAIN
PYLAFDTLLD MHKHGEFPRE VDASEVVYRY IKAVGKGILK VMSKMGISTY QSYCGAQIFD
AIGLNSQLID QYFFGTASNI EGIGLAEIAQ ETVARHHSAF GKDPILATSL DIGGEYAYRL
RGENHAWSPD SIASLQHAVR GNSQERYREF AAMVNESALR MNSIRGLFKI KKATDQGRQP
ISVDEVEPAA DIVKRFSTGA MSFGSISREA HTTLAIAMNR IGGKSNTGEG GEESDRYLPL
FNGSPNPERS AIKQIASGRF GVTTEYLVNA DMLQIKVAQG AKPGEGGQLP GHKVDATVAK
TRHSTPGVGL ISPPPHHDIY SIEDLAQLIY DLKNVNPAAD VSVKLVSEVG VGTVAAGVAK
ARADHITVSG FDGGTGASPL TSLKHAGSPW EIGLAETQQT LVMNGLRSRV ALQVDGGLKT
GRDVIIGALL GADEFGFATA PLIAAGCIMM RKCHLNTCPV GVATQDPVLR KRFKGTPEHV
INYFFFVAEE VREILASLGF AKLDDIIGAS ELLEKNDMLA HWKAEGLDFS KIFHKVEAPK
EATYWTERQH HPIEDVLDRR LIEKSMPALE SKQPVVFEVD IKNVDRSAGA MLSGELAKRW
GHKGLKDDTV HVTLNGTAGQ SFGAFLSRGI TFDLVGDGND YVGKGLSGGR IIVRPPENSR
IAAEHSIIVG NTVLYGAIAG ECYFRGVAGE RFAVRNSGAI AVVEGVGDHG CEYMTGGVVV
VLGETGRNFA AGMSGGVAYV LDEKGDFAKR CNMAMVELEP VPEEDDMLEK LHHHGGDLMH
KGLVDVSEDM TRHDEERLYQ LISNHLHYTG SNRAKQILDN WADYRPKFRK VMPVEYRRAL
EEMERMRMGV AAE
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