Gene Avi_3727 details

Gene Information

• Locus tag: Avi_3727
• Symbol: mltB
• ID: 7388195
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 3089761
• End bp: 3090978
• Gene Length: 1218 bp
• Protein Length: 405 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643652510
• Product: lytic murein transglycosylase
• Protein accession: YP_002550692
• Protein GI: 222149735
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2951] Membrane-bound lytic murein transglycosylase B
• TIGRFAM ID: [TIGR02283] lytic murein transglycosylase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAGAG AACGCGCCTC GCGCCATCTT CGCGCGCTTG CCTTTTCCCT CATGGCGAGC 
CTTGCGCCGC TTCATGCCCA TGCCGATGCG GGCTTCCAGA AGTGGATCCG GGATTTCTAT 
CCCGCGGCTG CTGCTGCGGG CATCAGCGCA CAAACCTATA ACCGCGCCTT TGCCGGCATC 
AAGGATCCGG ACCCCGATGT GCTGCGCAAG GCGGCCTATC AGCCGGAATT CAAATCGGAA 
ATCTGGGATT ATCTCGACAG CCGCGTCAAT CCCTATACTG TGAAGATCGG CCGGGAAATG 
CTGGCCAAGC ATGGCCGCAC GCTGGCCTCT CTGGAAAAAT ATTTCGGCGT TGACCGCCAT 
ATTCTGCTGG CGATCTGGTC GATGGAAAGC AATTACGGCG CGGTTCTCGC CAAGGATGAC 
CGGCTGCATT ACGTGCCGCA GGCGCTGGCC ACCCTTGGCT ATGCCGATCC CAAGCGCGGC 
GGTTTTGCCC GCAAGCAGCT TATCGCCGCC TTGAAAATCC TGCAAAACGG CGATGTGAGC 
CCGAAGGAAA TGACCGGCTC CTGGGCTGGC GCCATGGGCC ACACCCAGTT CATCCCGACC 
AGCTACCTGC TGTATGCGGT CGATGCCGAT GGCAATGGCC ATAAGGATAT CTGGAATTCC 
ATTCCCGATG CGCTGGCGAC CTCGGCCAAT CTTCTGGCCA AGAACGGCTG GGATAGTGGA 
CGGACCTGGG GTTATGAAAC CGTCGTGCCT GCGGGAGCCG GCAAATATGC CGGCAAGACG 
CTGACGATGG CCCAGTGGCA GAAGCTGGGC TTCACCCGCC CAGGCGGCAA GGCGTTCCGC 
AATCCGGGCG AACGGGCGCA GTTGAAGCTG CTGGCCGGTG CCAATGGTCC GGGCTTCCTG 
ATGACATCCA ACTTCTTCAC CATCAAGAAA TACAATGCCG CCGATACCTA TGCGCTGGCG 
GTCGGTCTTC TTGCCGACGA AATCGCCGGT TATGGTGGAA TGCAACAGAA ATGGCCACGG 
CCGGACGGCA CGCTGGACAT AAAGGAAAAG TTCGAGTTGC AGACCCGAAT GAAGGCTCTT 
GGCTATTATA ATGGCGAAGT GGACGGCAAT TTCGGCTCTG GTTCGAAAGC GGCGATTTCC 
GCCATCCAGC AACGGTTGGG CATGCAGGGC GATGGCGAAC CGTCAAAGCC GCTGCTGGAA 
ATGCTCAGGC GGCATTGA 

 

Protein sequence

MTRERASRHL RALAFSLMAS LAPLHAHADA GFQKWIRDFY PAAAAAGISA QTYNRAFAGI 
KDPDPDVLRK AAYQPEFKSE IWDYLDSRVN PYTVKIGREM LAKHGRTLAS LEKYFGVDRH 
ILLAIWSMES NYGAVLAKDD RLHYVPQALA TLGYADPKRG GFARKQLIAA LKILQNGDVS 
PKEMTGSWAG AMGHTQFIPT SYLLYAVDAD GNGHKDIWNS IPDALATSAN LLAKNGWDSG 
RTWGYETVVP AGAGKYAGKT LTMAQWQKLG FTRPGGKAFR NPGERAQLKL LAGANGPGFL 
MTSNFFTIKK YNAADTYALA VGLLADEIAG YGGMQQKWPR PDGTLDIKEK FELQTRMKAL 
GYYNGEVDGN FGSGSKAAIS AIQQRLGMQG DGEPSKPLLE MLRRH