| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3722 |
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| Symbol | kpsF |
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| ID | 7388192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3085833 |
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| End bp | 3086828 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652507 |
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| Product | capsule expression protein |
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| Protein accession | YP_002550689 |
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| Protein GI | 222149732 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGC TGGCTGTAAA ACTCGTGGAA GCAAGCGCCA TCAAGGCTGC ATTGCGTGTC
GTCGCTACCG AACAAAGCGG GCTGGCGGCC CTGGAAGAGG CTTTGGCAGG GTATCTTGCC
GGGCCGTTTT GCAACGCAAT CGATGTTATC GGCAAAAGCT CGGGCCGGGT GATCGTCTCT
GGCGTCGGCA AGAGCGGCCA CATCGGCGGC AAGATCGCGG CAACGTTCGC CTCGACAGGC
ACACCGGCTT TCTTCATCCA TCCGGCGGAA GCCAATCATG GCGACCTCGG CATGATTGCC
CGTGACGATG TGGTGATTGC CCTGTCCTGG GGCGGCGAAA GCACCGAGCT GAACGGAATC
CTGTCCTTCA CTCGCCGGTT TTCCATTCCA CTGATAGCCA TTACCGCCGG TGAGCAATCC
ACGTTGGCAC GTGAAGCCGA TATCGTGCTT TTGATGCCCA AGGTGCAGGA AGCCTGCCCG
CATGGCTTGG CGCCGACCAC CTCCACCATG ATGCAGATGG CGCTGGGCGA TGCGCTGGCG
CTGGCGCTGC TGGAAGCTCG TGGCTTCGGG CCGAATGATT TCAAGACCTT CCATCCGGGC
GGCAAGCTGG GCGCGATGCT GACTCATGTC GGCGACATGA TGCATATCGG CGAGGACGTG
CCGCTGGTGC CGGAAGGCAC ATCGGTGCCG GAAGCGATTA TCATGCTATC GCAGAAGCGT
TTTGGCTGCG TCGGCGTCAC CGACAGCGCT AACCGGTTGG TCGGTATCAT CACCGATGGC
GATATTGCCC GTAACCTCAA CCGCAATCTC GGTGAGCGGA TGGTGGAAGA GGTGATGACC
CGTCACCCAA AGACGGTTCA CACCGAAACA CTTGCGACCA CCGCCATGGC GATCCTCAAC
CAGCACAATA TTTCGGCGCT GTTTGTGACC GATGAAGACG GTGTGCCAAA CGGCATCATC
CACTTCCATG ATTTGTTGCG GATTGGTGTG GCTTAA
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| Protein sequence | MNKLAVKLVE ASAIKAALRV VATEQSGLAA LEEALAGYLA GPFCNAIDVI GKSSGRVIVS
GVGKSGHIGG KIAATFASTG TPAFFIHPAE ANHGDLGMIA RDDVVIALSW GGESTELNGI
LSFTRRFSIP LIAITAGEQS TLAREADIVL LMPKVQEACP HGLAPTTSTM MQMALGDALA
LALLEARGFG PNDFKTFHPG GKLGAMLTHV GDMMHIGEDV PLVPEGTSVP EAIIMLSQKR
FGCVGVTDSA NRLVGIITDG DIARNLNRNL GERMVEEVMT RHPKTVHTET LATTAMAILN
QHNISALFVT DEDGVPNGII HFHDLLRIGV A
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