Gene Avi_3711 details

Gene Information

• Locus tag: Avi_3711
• ID: 7388182
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 3073967
• End bp: 3075883
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643652497
• Product: 5prime-nucleotidase
• Protein accession: YP_002550679
• Protein GI: 222149722
• COG category: [F] Nucleotide transport and metabolism; [S] Function unknown
• COG ID: [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; [COG1652] Uncharacterized protein containing LysM domain

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.165492
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAAAAA GATTTAAATT TGGCCTGTTG AGCGCCTCGG TGCTCATCCT GTCGTCGGGG 
ACGGCCTTTG CCGATTTCGA ACTGAACATC CTGCATATCA ACGATTTTCA CTCACGGATC 
GAGTCGATCA ATAAATATGA TTCGACGTGC TCCGCGGATG AGGAAAGCAA GAACCAATGC 
TTTGGCGGTG CGGCCCGTTT GAAGACGGCG TTCGACCAGA CCCGCGCGGC ATTGGCTGGC 
AAGAATGTCC TGTCGCTGAA TGCCGGTGAC AATTTCCAGG GCTCGCTGTT TTACACCACC 
TACAAAGGCA CAGCCGAACT GGATGTGATG AACATCCTGA AGTTCGACGC CATGACGCTT 
GGTAATCACG AATTCGACGA CGGTGAGACA GCCATCGGTC CCTTCCTCGA CAAGGTGCAG 
TTTCCGGTCG TGGTCGCCAA TCTGGAAGCC AATGCCGAAT CGAAGCTGAA GGACAAGTTC 
AAGCCCTCGA CAATCCTGGA AATTGGCGGC CAGAAGATCG GCATCGTCGG CGCCGTTACC 
CCGGAAACCG TGGAACTGGC ATCGCCGGGT CCGAATGTGA AATTCACCGA CGATGTCGTT 
GCCATCACCG AAGAAGTGAA GAAACTGAAG ACCGAAGGCG TCAACAAGAT CATCGCCCTC 
ACCCATGTCG GCTATCACCG CGACATGGAA ATCGCCAAGA TCCCTGACGT CGATGTGGTG 
GTCGGCGGCC ATTCCCACAC ATTGCTGTCT AACAGTGATC CGAAGGCCGA AGGCCCCTAC 
CCGACGCTGG TCGACAATCC CGGCGGCTAC AAGGTGCCTG TCGTCACCGC TGCCTCCTAC 
AGCAAATATC TCGGTGATCT GACTGTTGTT TTCGACGATA ACGGCGTGGT GAAAAGTGCC 
AAGGGCGATC CGATCCTAAT CGATTCGAAA TTCAAGCCTG ATGAAGCAAT GACCGCCAAG 
GTCAAGGAAC TGGCCGGTCC TATCCAGGAA TTGCGCCAGA AGGAAATCGG CGAAAGTGCC 
GGCCCGATCG ACGGCGCCTC CACCACCTGC CGCGCCAAGG AATGCCCCAT GGGCAATCTG 
GTGGCCGAGG CAATGCTGGA TCATGCCCGC AGCCAGGGCA TCAGCATCGC CATCCAGAAT 
GGCGGCGGCC TGCGCGCCTC GATCGGCGGC GGCAAGGTCA CCATGGGCTC GGTCATCACC 
GTCCTGCCCT TCCAGAACAC GCTTGCCACC TTCCAGCTCA AGGGCTCCGA CGTGATTGCG 
GCGCTTGAAA ACGGTGTCAG CCAGGTGGAT GACGGCGCTG GCCGGTTCCC ACAGGTCGCC 
GGTCTGAAAT ACAGCTTCGA CCGTTCCAAG CCTGTCGGCA GCCGGATCGT TGACGTTCAG 
GTCAAGGACG GCGACGGCTT CGTGCCGCTC GATACCAGCA AACTCTATGG TGTCGTCACC 
AATAATTACA TGCGCACCGG TGGCGACGGC TACAAGATCT TCGCGACAGC AGGACAGAAC 
GCCTATGATT ACGGTCCGGA TCTCGCCGAT GTGACAGCCG ATTTCCTGGC CAAAAATTCG 
CCCTACAAGC CGTTTACCGA TGGCCGCGTC AGCGAAGTTA CGCCAGCTGG CTATGTCGCG 
CCAGCGGCCC AGCCGAAGAC GGCGACGGCT GCCCAAGCCA CGGCACCAGC TCCTGCCGCA 
CCTGCTCCGG CAACCCCTGC GCCCGCCGCC CCGGCGCCGG TAACCCCAGC AGTCTCCGCA 
CCGTCTGCCG CCGCCCAGCC AACGCAATAT ACCGTGGTCA AGGGTGATAG CCTGTGGAAG 
ATCGCTGAGG CCACCTATGG CGATGGCGAG GACTGGAAGA AGATTTCCGC CGCCAACAAG 
CTGCGCCATC CCGACCATAT CGAGATCGGT GACGTCTTGA CCGTTCCGGC AAAGTAA 

 

Protein sequence

MLKRFKFGLL SASVLILSSG TAFADFELNI LHINDFHSRI ESINKYDSTC SADEESKNQC 
FGGAARLKTA FDQTRAALAG KNVLSLNAGD NFQGSLFYTT YKGTAELDVM NILKFDAMTL 
GNHEFDDGET AIGPFLDKVQ FPVVVANLEA NAESKLKDKF KPSTILEIGG QKIGIVGAVT 
PETVELASPG PNVKFTDDVV AITEEVKKLK TEGVNKIIAL THVGYHRDME IAKIPDVDVV 
VGGHSHTLLS NSDPKAEGPY PTLVDNPGGY KVPVVTAASY SKYLGDLTVV FDDNGVVKSA 
KGDPILIDSK FKPDEAMTAK VKELAGPIQE LRQKEIGESA GPIDGASTTC RAKECPMGNL 
VAEAMLDHAR SQGISIAIQN GGGLRASIGG GKVTMGSVIT VLPFQNTLAT FQLKGSDVIA 
ALENGVSQVD DGAGRFPQVA GLKYSFDRSK PVGSRIVDVQ VKDGDGFVPL DTSKLYGVVT 
NNYMRTGGDG YKIFATAGQN AYDYGPDLAD VTADFLAKNS PYKPFTDGRV SEVTPAGYVA 
PAAQPKTATA AQATAPAPAA PAPATPAPAA PAPVTPAVSA PSAAAQPTQY TVVKGDSLWK 
IAEATYGDGE DWKKISAANK LRHPDHIEIG DVLTVPAK