Gene Avi_3711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3711 
Symbol 
ID7388182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3073967 
End bp3075883 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content59% 
IMG OID643652497 
Product5prime-nucleotidase 
Protein accessionYP_002550679 
Protein GI222149722 
COG category[F] Nucleotide transport and metabolism
[S] Function unknown 
COG ID[COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
[COG1652] Uncharacterized protein containing LysM domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.165492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAA GATTTAAATT TGGCCTGTTG AGCGCCTCGG TGCTCATCCT GTCGTCGGGG 
ACGGCCTTTG CCGATTTCGA ACTGAACATC CTGCATATCA ACGATTTTCA CTCACGGATC
GAGTCGATCA ATAAATATGA TTCGACGTGC TCCGCGGATG AGGAAAGCAA GAACCAATGC
TTTGGCGGTG CGGCCCGTTT GAAGACGGCG TTCGACCAGA CCCGCGCGGC ATTGGCTGGC
AAGAATGTCC TGTCGCTGAA TGCCGGTGAC AATTTCCAGG GCTCGCTGTT TTACACCACC
TACAAAGGCA CAGCCGAACT GGATGTGATG AACATCCTGA AGTTCGACGC CATGACGCTT
GGTAATCACG AATTCGACGA CGGTGAGACA GCCATCGGTC CCTTCCTCGA CAAGGTGCAG
TTTCCGGTCG TGGTCGCCAA TCTGGAAGCC AATGCCGAAT CGAAGCTGAA GGACAAGTTC
AAGCCCTCGA CAATCCTGGA AATTGGCGGC CAGAAGATCG GCATCGTCGG CGCCGTTACC
CCGGAAACCG TGGAACTGGC ATCGCCGGGT CCGAATGTGA AATTCACCGA CGATGTCGTT
GCCATCACCG AAGAAGTGAA GAAACTGAAG ACCGAAGGCG TCAACAAGAT CATCGCCCTC
ACCCATGTCG GCTATCACCG CGACATGGAA ATCGCCAAGA TCCCTGACGT CGATGTGGTG
GTCGGCGGCC ATTCCCACAC ATTGCTGTCT AACAGTGATC CGAAGGCCGA AGGCCCCTAC
CCGACGCTGG TCGACAATCC CGGCGGCTAC AAGGTGCCTG TCGTCACCGC TGCCTCCTAC
AGCAAATATC TCGGTGATCT GACTGTTGTT TTCGACGATA ACGGCGTGGT GAAAAGTGCC
AAGGGCGATC CGATCCTAAT CGATTCGAAA TTCAAGCCTG ATGAAGCAAT GACCGCCAAG
GTCAAGGAAC TGGCCGGTCC TATCCAGGAA TTGCGCCAGA AGGAAATCGG CGAAAGTGCC
GGCCCGATCG ACGGCGCCTC CACCACCTGC CGCGCCAAGG AATGCCCCAT GGGCAATCTG
GTGGCCGAGG CAATGCTGGA TCATGCCCGC AGCCAGGGCA TCAGCATCGC CATCCAGAAT
GGCGGCGGCC TGCGCGCCTC GATCGGCGGC GGCAAGGTCA CCATGGGCTC GGTCATCACC
GTCCTGCCCT TCCAGAACAC GCTTGCCACC TTCCAGCTCA AGGGCTCCGA CGTGATTGCG
GCGCTTGAAA ACGGTGTCAG CCAGGTGGAT GACGGCGCTG GCCGGTTCCC ACAGGTCGCC
GGTCTGAAAT ACAGCTTCGA CCGTTCCAAG CCTGTCGGCA GCCGGATCGT TGACGTTCAG
GTCAAGGACG GCGACGGCTT CGTGCCGCTC GATACCAGCA AACTCTATGG TGTCGTCACC
AATAATTACA TGCGCACCGG TGGCGACGGC TACAAGATCT TCGCGACAGC AGGACAGAAC
GCCTATGATT ACGGTCCGGA TCTCGCCGAT GTGACAGCCG ATTTCCTGGC CAAAAATTCG
CCCTACAAGC CGTTTACCGA TGGCCGCGTC AGCGAAGTTA CGCCAGCTGG CTATGTCGCG
CCAGCGGCCC AGCCGAAGAC GGCGACGGCT GCCCAAGCCA CGGCACCAGC TCCTGCCGCA
CCTGCTCCGG CAACCCCTGC GCCCGCCGCC CCGGCGCCGG TAACCCCAGC AGTCTCCGCA
CCGTCTGCCG CCGCCCAGCC AACGCAATAT ACCGTGGTCA AGGGTGATAG CCTGTGGAAG
ATCGCTGAGG CCACCTATGG CGATGGCGAG GACTGGAAGA AGATTTCCGC CGCCAACAAG
CTGCGCCATC CCGACCATAT CGAGATCGGT GACGTCTTGA CCGTTCCGGC AAAGTAA
 
Protein sequence
MLKRFKFGLL SASVLILSSG TAFADFELNI LHINDFHSRI ESINKYDSTC SADEESKNQC 
FGGAARLKTA FDQTRAALAG KNVLSLNAGD NFQGSLFYTT YKGTAELDVM NILKFDAMTL
GNHEFDDGET AIGPFLDKVQ FPVVVANLEA NAESKLKDKF KPSTILEIGG QKIGIVGAVT
PETVELASPG PNVKFTDDVV AITEEVKKLK TEGVNKIIAL THVGYHRDME IAKIPDVDVV
VGGHSHTLLS NSDPKAEGPY PTLVDNPGGY KVPVVTAASY SKYLGDLTVV FDDNGVVKSA
KGDPILIDSK FKPDEAMTAK VKELAGPIQE LRQKEIGESA GPIDGASTTC RAKECPMGNL
VAEAMLDHAR SQGISIAIQN GGGLRASIGG GKVTMGSVIT VLPFQNTLAT FQLKGSDVIA
ALENGVSQVD DGAGRFPQVA GLKYSFDRSK PVGSRIVDVQ VKDGDGFVPL DTSKLYGVVT
NNYMRTGGDG YKIFATAGQN AYDYGPDLAD VTADFLAKNS PYKPFTDGRV SEVTPAGYVA
PAAQPKTATA AQATAPAPAA PAPATPAPAA PAPVTPAVSA PSAAAQPTQY TVVKGDSLWK
IAEATYGDGE DWKKISAANK LRHPDHIEIG DVLTVPAK