Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3710 |
Symbol | |
ID | 7388181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 3073391 |
End bp | 3073783 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643652496 |
Product | outer membrane lipoprotein |
Protein accession | YP_002550678 |
Protein GI | 222149721 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.1502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTGCC GGATGGAGAC TGTCATGAAG GTCAAAAGCA TCGCAATTCT GCTCGTCGCG GCCTTTGCCG TGTCTTCCTG CGTGGGCACG CCGCCGCCGC GCCAGGTCGC CTATAATGCG CCGCAGCCAC AGGGCGTTGA TGGCGCCTGG GTCGATCCGA ACGGCATCGT TTCCACCTTC CAGGGCGGCA CGTTTGCCAC CCGCTCCAGC GATACCAATG CGCTTCTGGC CTCCGGAACC TATACCAATA CCTCGCCGAC GCTGGTGGAG ATCAACATGA CCTCGCTGGT GCGCAAGACC CAATCGCGGG TCAATTGCGC GCTGGTTTCG CCAGAACAGT TGAACTGCAC CACGGATGCC GGCTCGAATT TCTCGCTGCG CCGCAAGATC TGA
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Protein sequence | MSCRMETVMK VKSIAILLVA AFAVSSCVGT PPPRQVAYNA PQPQGVDGAW VDPNGIVSTF QGGTFATRSS DTNALLASGT YTNTSPTLVE INMTSLVRKT QSRVNCALVS PEQLNCTTDA GSNFSLRRKI
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