Gene Avi_3710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3710 
Symbol 
ID7388181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3073391 
End bp3073783 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content61% 
IMG OID643652496 
Productouter membrane lipoprotein 
Protein accessionYP_002550678 
Protein GI222149721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.1502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTGCC GGATGGAGAC TGTCATGAAG GTCAAAAGCA TCGCAATTCT GCTCGTCGCG 
GCCTTTGCCG TGTCTTCCTG CGTGGGCACG CCGCCGCCGC GCCAGGTCGC CTATAATGCG
CCGCAGCCAC AGGGCGTTGA TGGCGCCTGG GTCGATCCGA ACGGCATCGT TTCCACCTTC
CAGGGCGGCA CGTTTGCCAC CCGCTCCAGC GATACCAATG CGCTTCTGGC CTCCGGAACC
TATACCAATA CCTCGCCGAC GCTGGTGGAG ATCAACATGA CCTCGCTGGT GCGCAAGACC
CAATCGCGGG TCAATTGCGC GCTGGTTTCG CCAGAACAGT TGAACTGCAC CACGGATGCC
GGCTCGAATT TCTCGCTGCG CCGCAAGATC TGA
 
Protein sequence
MSCRMETVMK VKSIAILLVA AFAVSSCVGT PPPRQVAYNA PQPQGVDGAW VDPNGIVSTF 
QGGTFATRSS DTNALLASGT YTNTSPTLVE INMTSLVRKT QSRVNCALVS PEQLNCTTDA
GSNFSLRRKI