| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3699 |
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| Symbol | |
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| ID | 7388175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3064108 |
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| End bp | 3065427 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652490 |
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| Product | sigma 54 dependent transcriptional activator |
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| Protein accession | YP_002550672 |
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| Protein GI | 222149715 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.112832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTGTCA TCGTGCAGAC CGGTCAGGGC GGCATCGATA CCGTGGTGCA GGCCATGCGG
GCTGGCGCCT TCGATTTCGT CGTCAAGCCG GTCTCGCCGG AGCGAATCGC ATCGGCCATC
GGCAATGCGC TACGCGTCGA CCAGCGCGAC GCCAAGTCGC GTCCTGCACG CCGGTCACGC
ACCGGGGCGG TGCATTTCTC CGATATCATT TCGGCAAGTC CGGCCATGAC CCGGGTCATC
GACCTGTCGC GCCGTGCGGC CCAATCGAAT ATCCCTGTCG TGCTGGAAGG CGAATCGGGC
GTTGGCAAGG AAATGGTCGC CCGGGCTATC CAGTCGGGCA GCGACCGTGC GTCGCGGCCT
TTTGTCACGG TCAATTGCGC TGCCATTCCC GCCAATATGG TGGAAAGCAT TCTGTTCGGC
CATGAAAAGG GATCTTTCCC CGGTGCCACG GAACGCCATA TCGGCAAGTT CGCCGAGGCT
GACGGCGGCA CGCTGTTCCT CGATGAGATC GGCGAATTGC CGCTCGATAC CCAGGTGAAG
CTGCTGCGGG CCGTGCAGGA AGGCGAAATC GAGGTTATCG GCGCCCGCCA GACCCAGAAG
GTCAATGTGC GGCTAATCTC GGCGACCAAC AAGGACCTGA TCGAAGAGGT CAAGGCTGGC
CGGTTCCGCG AGGACCTTTA TTACCGCCTC AACGTCTTCC CCATCACCAT TCCGGCTCTG
CGCCGCCGCA AGGAGGACAT TCCCTTCCTG GCGCGCGCCT TTACCGAACG GTTCTCGGCA
GAGCAGCGTC TGACCCGGAC CCTGTCTCTG GGGGCTGGCG CACTTGCATT GCTGACGGCC
TTCGATTGGC CCGGCAATAT TCGCCAGCTG GAAAATGCCA TCTACCGGGC GGTGATTCTT
GCCGAAGGTA CGGATCTGAC GGAAAGCGAT TTCCCGCAGA TCCTGGCACA GATCCCAGGC
GGTTTGGCGC AGGACAAGTT CTGGTCGGGT CTGCCTGGCA CGGCCGAAAG CCAGCCGGAA
CAGGTGGCGC CGCGCGGTGC AGACCGGCCG GAACTGGCCT TTATCGACCG GCTACCTGCC
CCCCGCGCCG AGGACCCGCG TCCGGTGGCG TTGGACAATG TCATCGTCAG CATCGACGAG
AGCGGCAATG TCCGGCAATT GGCTGAGATC GAGGAAGAAC TGATTCGTTT CGCGCTGAAA
TTCTACCGAG GCCAGATGAG CCAGGTGGCA CGCAAGCTTG GAATCGGTCG CTCAACACTC
TATCGCAAAC TGAAGGATTA CGGGATCGAC CCGGATAATC CGCAGAAGCA CGCCGCCTGA
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| Protein sequence | MPVIVQTGQG GIDTVVQAMR AGAFDFVVKP VSPERIASAI GNALRVDQRD AKSRPARRSR
TGAVHFSDII SASPAMTRVI DLSRRAAQSN IPVVLEGESG VGKEMVARAI QSGSDRASRP
FVTVNCAAIP ANMVESILFG HEKGSFPGAT ERHIGKFAEA DGGTLFLDEI GELPLDTQVK
LLRAVQEGEI EVIGARQTQK VNVRLISATN KDLIEEVKAG RFREDLYYRL NVFPITIPAL
RRRKEDIPFL ARAFTERFSA EQRLTRTLSL GAGALALLTA FDWPGNIRQL ENAIYRAVIL
AEGTDLTESD FPQILAQIPG GLAQDKFWSG LPGTAESQPE QVAPRGADRP ELAFIDRLPA
PRAEDPRPVA LDNVIVSIDE SGNVRQLAEI EEELIRFALK FYRGQMSQVA RKLGIGRSTL
YRKLKDYGID PDNPQKHAA
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