Gene Avi_3691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3691 
Symbol 
ID7388087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp3058858 
End bp3059472 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content56% 
IMG OID643652484 
Producthypothetical protein 
Protein accessionYP_002550666 
Protein GI222149709 
COG category[S] Function unknown 
COG ID[COG5480] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.296318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTAGCGT CACCATACAG TCAAACTCAT CCCTCATCAT TCGCTTGGGG ATTACAATCG 
ATTAGACTTG CGTTGACTTT CTTGGTCCAT AGTCGCAAGA AGGCAACACA GAAAAATGGA 
GTTCCGTCGG AAGCCGTGCC TCATTCCAAC ACACTCTCTT CCGTTACAGG TTCCGGGCGT 
CTTGCACGTC TCGGCCTGTT TTTGACCATT GTATTTTCAC CGATTGCTTA TGCCGCACCC 
GCGCAGGCGG ATTTTCGCGT TTGCAATGGT TCGGCCAATC TCGTCGGCGT GGCCATTGGC 
TATCGGGCGG CGGAAGGCTG GATCAGCGAG GGCTGGTGGC AAGTACCCGC TTCGACCTGC 
GCAACGCTGA TCGAAGGCGA GCTGAAATCG CGCTACTATT ATCTCTACGC AGAAGATGCC 
GCCCGCGGTG GTCGCTGGAC CGGCAATGTC AACATGTGCG TGGCGGAAAA CGAGTTCAAG 
ATCGTTGGCG TCGGGGATTG TTTCAAGCGC GGTTACCAGC AAATGGGTTT CAAGGAATAT 
GACACGGGCC GCCAGGGGAG CTGGATGGTT CAGTTGTCCG ACACGCCCGG CACGCAGGAA 
GGCCAGAAGC AATGA
 
Protein sequence
MLASPYSQTH PSSFAWGLQS IRLALTFLVH SRKKATQKNG VPSEAVPHSN TLSSVTGSGR 
LARLGLFLTI VFSPIAYAAP AQADFRVCNG SANLVGVAIG YRAAEGWISE GWWQVPASTC 
ATLIEGELKS RYYYLYAEDA ARGGRWTGNV NMCVAENEFK IVGVGDCFKR GYQQMGFKEY 
DTGRQGSWMV QLSDTPGTQE GQKQ