Gene Avi_3684 details

Gene Information

• Locus tag: Avi_3684
• Symbol: purK
• ID: 7388082
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 3053266
• End bp: 3054321
• Gene Length: 1056 bp
• Protein Length: 351 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643652479
• Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
• Protein accession: YP_002550661
• Protein GI: 222149704
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
• TIGRFAM ID: [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0394061
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGACCA TTGGAATTAT CGGCGGCGGC CAGCTTGGCC GCATGCTTGC TATGGCCGCA 
GCAAGGCTGG GGCTGAAGAC CATCGTGCTG GAACCGCAGG CCGACTGTCC GGCCGCCCAG 
GTTGCCAACC GGCAGATATC AGCCAATTAC GCTGACGAGG CAGCCCTTGC CGAACTGGCC 
GCCAGTTGCG ACGTGGTCAC CTACGAGTTT GAAAACGTGC CGGTCGCCGC CGCCGAAGCC 
CTGGCGCGCA GCGTGCCGGT CTACCCCCCA GCCAAGGCAC TTGCCGTGTC CCAGGACAGG 
TTGAGCGAAA AGCGCTTTCT CAACGACAAT GGCATTGCCA CCGCCCCGTT TCGCACCGTC 
GACAGCCAGG CGGACCTGGA GCAGGCATTG GCCGAATTCG GTGGCGAAGG CGTGCTGAAA 
ACCCGCCGCT TCGGCTATGA CGGCAAGGGC CAGCGGGTCT ATCGCAAGGG TGACGATGCC 
AGCGGCGGCT ATCAGGCGCT TGGTGCCGTG CCGCTGATTC TCGAAGGTTT CGTGCCGTTT 
GCGCGGGAAA TCTCGATCAT CGCCGCCCGT TCGATATCAG GCGAAATCGC CTGCTACGAT 
CCGGCTGAAA ATATTCACCG CGACGGCATC CTGCACACCT CCACCGTGCC TGCGTCGATT 
TCGCCGCAGA CCGCCGCTGC GGCCAAAAGT GCGGCGGAAA AGCTGCTGAC CGGCCTCGAC 
TATGTCGGCG TGGTCGGGCT CGAACTGTTC CTGATGGCCG ATGGCAGCCT GATCGCCAAT 
GAAATGGCCC CTCGGGTCCA CAATTCCGGC CATTGGACGG AAGCGGCCTG CGTGATCTCG 
CAATTCGAAC AACATATCCG CGCCGTTACC GGGTTGCCAC TGGGCGATCC GGCCCGCCAC 
GGCGATTGCG TCATGACCAA TCTGATCGGC GACGATATTG TCGCCGTTCC AGATTGGCTG 
GCGAAACCCG GTGCGCTCGT CCATCTCTAT GGCAAGGCTG AAGCACGGCC CGGCCGCAAA 
ATGGGACATG TCACCGAGGT CAGGAACCGG GAATAA 

 

Protein sequence

MKTIGIIGGG QLGRMLAMAA ARLGLKTIVL EPQADCPAAQ VANRQISANY ADEAALAELA 
ASCDVVTYEF ENVPVAAAEA LARSVPVYPP AKALAVSQDR LSEKRFLNDN GIATAPFRTV 
DSQADLEQAL AEFGGEGVLK TRRFGYDGKG QRVYRKGDDA SGGYQALGAV PLILEGFVPF 
AREISIIAAR SISGEIACYD PAENIHRDGI LHTSTVPASI SPQTAAAAKS AAEKLLTGLD 
YVGVVGLELF LMADGSLIAN EMAPRVHNSG HWTEAACVIS QFEQHIRAVT GLPLGDPARH 
GDCVMTNLIG DDIVAVPDWL AKPGALVHLY GKAEARPGRK MGHVTEVRNR E