| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3675 |
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| Symbol | thiE |
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| ID | 7388076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3049439 |
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| End bp | 3050122 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652473 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_002550655 |
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| Protein GI | 222149698 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAGA CGGAAATCGC CATGTCCAAG TCGCCCAAGT TCCAAAGCCG CTGTCGGCTT
GTTCTTATCA CGCCGCAGAT TGCCGATGTG CAGATGCTTG CCACGACTGT CGGCAATGCC
TTGAAGGGTG GCGATGTCGC CTCGGTGATC ATCCCGCAAT ATGATTTTGA TGACGATACG
TTCCAGGCCC AGGCCGAAGC GGTCGTGCCG CTGGTGCAGG CAGCGGGTGC CGCTGCCATC
ATCGCCGACA ATAGCCGGGT TGCCGGTCGC GCCAAGGCCG ATGGCCTGCA TATCAGCGGC
GATGTCGAGG CGCTGGCCGA GGCGGTGGAA AAATTCACCC CGAAGATGAT TGTCGGCTCC
GGTGCTGCCC GCGACCGGCA CCATGCGCTG GAGGCTGGCG ATGCCGACCC CGACTACATG
TTTTTCGGCA AGCTGGATGG CGATATCAAG CCGGAAGCGC ATTCGAAAAA CCTGGCCTTG
GGCGAATGGT GGTCGTCGAT GGTGGAGATC CCCTGCATCG TCATGGGCGG CGCAGATCCG
CAATCGGCCC TGGCTGTCGC TGAAACCGGC GCGGAATTTG CGGCCCTCTC CAGGGCGGTG
TTTGACGATC CGGAGGCAGC CGCCACCGTG GTTGCTCAGG TAAATGCTTT GCTTGACGAA
AAAGCGCCAC GGTTTGAGGA TTGA
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| Protein sequence | MKKTEIAMSK SPKFQSRCRL VLITPQIADV QMLATTVGNA LKGGDVASVI IPQYDFDDDT
FQAQAEAVVP LVQAAGAAAI IADNSRVAGR AKADGLHISG DVEALAEAVE KFTPKMIVGS
GAARDRHHAL EAGDADPDYM FFGKLDGDIK PEAHSKNLAL GEWWSSMVEI PCIVMGGADP
QSALAVAETG AEFAALSRAV FDDPEAAATV VAQVNALLDE KAPRFED
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