Gene Avi_3674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3674 
SymbolenhC 
ID7388075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3047820 
End bp3049442 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content62% 
IMG OID643652472 
Productenhanced entry protein 
Protein accessionYP_002550654 
Protein GI222149697 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.203101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACGCCT CAATGACCCT TGCCTTGCCC CGTCTTGCCC TAACCCGTTT GGCCAAATTC 
CGGTTGCTGT CTGGACGATC CGTCTGTGCA AGCCTGGTTT TGGCGCTGGC ATGTCCGACG
GTCATGGACA TCGGTGCTTA TGCGCAGGTT CCGCCTGCGG CATCCTCACC TCCGGCGGCG
AAGCCTGATG TGAAGGCGGG TGAGGGCAAA TCAGGCGAGG CTGCCGATCA GGCCTCTCCT
GAGACGCCAT CGGAAAAGGC TGGAGAGCAA GGGCGAGGCC CAAAGCCGGG AAACGAAATC
GAGGTGCCAA TCGCTCCTGA CGATAAAACG GCTCCCGAAA ACACCCCTGG CTCTGACCAG
ACAAACGGTT TTGTCAGGCC GAGCGGGCTT TCCGGTCCGG TATCCGGTGA GGATGCTGGC
AAGGTACAGC GGCCGGGCGT GAAGGATGCG GGACCGGCTG GCGGTATTAC GCTGATGGAG
CGCATGGGTA TTCCGCTGCC GGATCTACCG CCGGAAAAGC CCTATACCGG CAAGGTCGAT
CTTGCCTATG GCGCGTTCCA GCGCGGACTG TTTGCCACCG CCTTCGATTA CGCCCTGCCG
CTCGCCGAGA AGGGCGATCC CGCCGCGCAG ACATTGATTG CCGAGCTGAT GACCCGTGGT
CTGGCGGTCA AGCGCGACAT GAAGGGAGCG GCCTTCTGGT ATGGCAAGGC CGCTGCGGGT
GGCGATCCGG CGGCAATGTT CAAATATGCG CTGATGTTGA TCGAAGGGCG CTATGTCTCG
CCGGATCGCA AGCTGGCCGA TGACTATATG CGCCGGGCAG CGGAAGCGGG CAATGCGTCG
GCCCAGTTCA ATTGGGCGCA ATTGCTGGTC TCGGAAAATC CCGGCAAGAA GGGATTGCTG
TTGGCGCTGC CTTTCTACGA GCAATCGGCG GAACAAGGCA TCGCCGATGC GCAATATGCC
GTCGCTCAGA TCTATCGCAA CCTGTCGGAC GTGCCGGCGG AAAAGCGACA GCTGGCGCGC
GAATGGCTGG TGCGGGCGGC GCGTGCCGGT TTCGATACCG CCGAGCTTGA TATCGGCATC
TGGTTGATTA ACGGCATTGC CGGGCCGCAG GATCTGGAGC AGGGCTTCAA ATGGTTGCGG
ATTGCCGCCA ATCGCGGCAA TGTCGCGGCC CAGAACCGGC TGGCGCATGT GTATGTGGCG
GCGCTCGGTA CCCGGCCCGA TCCGGTCGAG GCGGCGAAAT GGTATGTGCT GTCGCGTCGG
GCCGGCCTTG CCGATCCGGC TCTTGAGGAT TTCTATCTCG GCCTGCCGGA TAGCCAGCAG
AAACAGGCAA TTGAAGCGGC CAACAAATAC CGGACCGGCC AGCACAGACT GGGTCGCCCG
GTATCGAAGG CCCAAGGCTC AACGACGGGC AAAAATGGGG CGAGGGACGA GGTCAGCGAC
ATCATCAGCA AGGCTGCAAA GCCGGTGACG CCACCGCCCA TCGACCCGAC CGGGCTTCCG
GGCGTCTCCC TGCCTCCTGT GGGGGGCAAG CTCCAAAATG ACGTCCCCAA AAATGATGCA
GACAAGGATG AAAATCCCGA CGATGGCACC GATGTGCCGG ATCAGCCGCC CGCCGCCCCC
TGA
 
Protein sequence
MNASMTLALP RLALTRLAKF RLLSGRSVCA SLVLALACPT VMDIGAYAQV PPAASSPPAA 
KPDVKAGEGK SGEAADQASP ETPSEKAGEQ GRGPKPGNEI EVPIAPDDKT APENTPGSDQ
TNGFVRPSGL SGPVSGEDAG KVQRPGVKDA GPAGGITLME RMGIPLPDLP PEKPYTGKVD
LAYGAFQRGL FATAFDYALP LAEKGDPAAQ TLIAELMTRG LAVKRDMKGA AFWYGKAAAG
GDPAAMFKYA LMLIEGRYVS PDRKLADDYM RRAAEAGNAS AQFNWAQLLV SENPGKKGLL
LALPFYEQSA EQGIADAQYA VAQIYRNLSD VPAEKRQLAR EWLVRAARAG FDTAELDIGI
WLINGIAGPQ DLEQGFKWLR IAANRGNVAA QNRLAHVYVA ALGTRPDPVE AAKWYVLSRR
AGLADPALED FYLGLPDSQQ KQAIEAANKY RTGQHRLGRP VSKAQGSTTG KNGARDEVSD
IISKAAKPVT PPPIDPTGLP GVSLPPVGGK LQNDVPKNDA DKDENPDDGT DVPDQPPAAP