Gene Avi_3634 details

Gene Information

• Locus tag: Avi_3634
• ID: 7388049
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 3016995
• End bp: 3018875
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643652447
• Product: potassium/proton antiporter
• Protein accession: YP_002550629
• Protein GI: 222149672
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.698781
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGGAGC GATGTCTTGG GCCGGGGTAT CGTGCCAGAC GGGGGCGAAA GGCCAGAAAG 
GGCGAAAGGT TGGAACATTT CTACATCGTC ACGCTGGTTC TGACGGCGCT GATCCTGTTT 
GCGGCTTTTT CCAGCCTGAT CGCCTTTCGC TTTGGCGCGC CGCTGCTGCT GTTGTTTCTG 
GTCATCGGGT TGATGGCCGG GGTCGATGGT CTCGGCATTC ATTTCGACAA TCATTCCGTT 
GCCTATACCA TCGGCTCGCT GGCGCTGGCC GTTATCCTGT TTGATTCCGG CTATACGACC 
TCGCTGCAAT CCTTCAAACA GGCGGCAGGG CCGTCGATCA TGCTGGCAAC GGTCGGGGTT 
TTGTTGACGG CGGGGTTGTT CGGTCTGCTG GCCTGCTGGC TGTTGAAATT GTCGCTGCTG 
GAAGGCATGC TGCTTGGCTC CATCGTCGCC TCCACCGATG CGGCGGCGGT GTTCTTCCTG 
TTGCGAATTG GCGGCATCAA TATCCGTGAC AAGGTTCGCT CCTCGCTGGA AGTGGAATCC 
GGCACCAATG ATCCGATGGC GATCTTTCTC ACCCTGGCGC TGGTGCAGAT GGTGTCCACT 
GGCAAGGATC ATACCGGTCT CGACTGGAGC CTGCTGCGGA TGTTCGTCGA GCAGATGGGC 
ATGGGTCTGG CGCTCGGGCT GATCGGCGGG GCGATGATGG CGATGATCGT CAAGAAAATC 
CCGATTGATC GCGGCCTGTT ACCGATCATC GTGCTGGCCA TGTCGATGGT GATCTTTTCC 
TATACCGGCG CCATCGGCGG CAGCGGCTTC CTGGCCGTCT ATGTCGCGGG CATCTATGCC 
GGAAACCGCA AGATCCCCGG CAGCGCTTCA ATTGCCCGCT TCCAGGAGGG CATGACCTGG 
CTGGCGCAGA TCATCATGTT TCTGGTGCTC GGGCTTCTGG CCACGCCGTC GCATTTCATC 
AAGATCCTGT TTCCGGCGGT GGTTCTTGGC CTGTTTCTGG TGTTTATCGC CCGGCCCGCA 
GCGGTCTGGC TGTGTCTCAT TCCCTTCGAT TATACCCATC AGGAAAAGCG GTTCATCTCC 
TGGGTCGGCT TGCGCGGCGC GGTGTCCATC CTGCTCGGCA TTCTGCCGAT CCTCGGTGAT 
CTGAAGGGTG GTGAGGTCTA TTTCAACACC GCCTTCATCG TAGTGATGAT TTCGCTGCTG 
CTTCAGGGCT GGACCATCAA GCCAATGGCC AAACGGCTCG GCCTGATCAT CCCGCCGCGC 
ATCGGCGCTA TCGACAAGGT GGAGCTGGAT CTGCCGGGTG CTGCCCATCA CGAGTTGCTG 
TCCTATCGCG TCGTGGCGGG CAGTCCGGTG CTCAGCGGCG CGCGCATTCC GCGCTGGGCC 
ATGCCATCGC TGGTGATCCG CGATGGCAAA TCCATGCGCT ACCAATATGC GGGCCGGCTG 
CGGGAAAACG ATCAGGTCTA TCTGTTCATT GCCCCCGGTT ATCCGCGGCT GCTTGACCGT 
TTGTTTGCCA GCAAGGCGCC TGTCGATGAT GACGATAGCG AGTTTTTTGG CACCTTTACC 
ATTTCACCCT CGCGTCCCGC CGCCGAACTG GATGCGGCCT ACGGGCCCGG GCTTTTGAAC 
GAGGCCGACC GGCAAAAAAC CGTTGGCGAA CTGATGGAAG CGCGCCTCGG TGGCAAGGCC 
GAATATGCCG ACCGGGTCCG GCTCGGCCAT ATCATCCTGA TCGTCCGCGA TATCGGCGAA 
ACCGGCCATA TTTCCTCCGT TGGCGTCTCC ATGGAAGCGG TTGCGCCAAC CGATAACGCG 
CCCGCCTTCC TCAGCCTGAC CGGCACGGCC CATTGGCTGG CGGGCCTGCG CCATAAGCTG 
CGGGCGGCTG TGCAAAAGTA G 

 

Protein sequence

MVERCLGPGY RARRGRKARK GERLEHFYIV TLVLTALILF AAFSSLIAFR FGAPLLLLFL 
VIGLMAGVDG LGIHFDNHSV AYTIGSLALA VILFDSGYTT SLQSFKQAAG PSIMLATVGV 
LLTAGLFGLL ACWLLKLSLL EGMLLGSIVA STDAAAVFFL LRIGGINIRD KVRSSLEVES 
GTNDPMAIFL TLALVQMVST GKDHTGLDWS LLRMFVEQMG MGLALGLIGG AMMAMIVKKI 
PIDRGLLPII VLAMSMVIFS YTGAIGGSGF LAVYVAGIYA GNRKIPGSAS IARFQEGMTW 
LAQIIMFLVL GLLATPSHFI KILFPAVVLG LFLVFIARPA AVWLCLIPFD YTHQEKRFIS 
WVGLRGAVSI LLGILPILGD LKGGEVYFNT AFIVVMISLL LQGWTIKPMA KRLGLIIPPR 
IGAIDKVELD LPGAAHHELL SYRVVAGSPV LSGARIPRWA MPSLVIRDGK SMRYQYAGRL 
RENDQVYLFI APGYPRLLDR LFASKAPVDD DDSEFFGTFT ISPSRPAAEL DAAYGPGLLN 
EADRQKTVGE LMEARLGGKA EYADRVRLGH IILIVRDIGE TGHISSVGVS MEAVAPTDNA 
PAFLSLTGTA HWLAGLRHKL RAAVQK