| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3609 |
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| Symbol | ruvB |
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| ID | 7388031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2999147 |
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| End bp | 3000190 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652429 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_002550611 |
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| Protein GI | 222149654 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCTC AAAACCCTGT CCTCACCCCG GAAAAGCGCG GCGAAGACGT TGATTCGGCG
CTCAGACCGC AGACCCTGGA CGACTTTACC GGCCAGGCGG AGGCCCGCGC CAATCTGAAG
ATCTTCATCG AAGCCGCCAA GAACCGGGGC GAGGCGCTGG ATCATGTGCT GTTCGTCGGC
CCACCGGGCC TGGGCAAGAC AACGCTGGCG CAGATCATGG CCAAGGAACT GGGCGTCAAT
TTCCGCTCGA CCTCCGGTCC TGTCATCGCC AAGGCGGGGG ATCTCGCCGC GCTTCTCACC
AATCTGGAAG AACGCGACGT GCTGTTCATC GATGAAATCC ATCGTTTGAG CCCAGCGGTG
GAGGAAATTC TCTATCCAGC GATGGAGGAT TTCCAGCTTG ACCTGATCAT CGGCGAAGGC
CCGGCGGCGC GCTCGGTGAA AATCGACCTT TCCAAATTCA CCCTGGTCGC CGCCACCACA
AGGCTTGGCC TGTTGACCAC GCCGTTGCGC GATCGGTTCG GCATTCCGGT GCGGCTGTCC
TTCTATACGG TCGAGGAGCT GGAGCTGATC GTGCGGCGCG GCGCGCGCCT GATGGGGCTA
GGCATGACCG ATGACGGGGC GCGCGAAATT GCCAGGCGCG CCCGCGGCAC GCCGCGCATT
GCAGGACGGC TGCTGCGCCG GGTTCGCGAT TTTGCCGAGG TCGCCCGCGC CCCTGCCGTC
ACCCGCGAGA TCGCCGATGA GGCGCTCACG CGGTTGTTAG TGGACAATAT GGGCCTTGAT
CAGCTCGACA CCCGTTATTT GACCATGATT GCCGTCAATT TTGGTGGGGG ACCAGTCGGC
ATTGAAACCA TTGCCGCGGG CCTGTCTGAA CCACGTGACG CCATCGAGGA TATTATCGAG
CCCTATATGA TCCAGCAGGG CTTCATCCAG CGCACCCCGC GTGGCCGCGT GTTGACCGCG
ATTGCCTGGA AGCATCTGGG CCTGATGCCG CCGAAAGACA TGGAGGCCGC GCAGTTTCGC
CTGACCCTTG AGGATGACGA TTGA
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| Protein sequence | MSAQNPVLTP EKRGEDVDSA LRPQTLDDFT GQAEARANLK IFIEAAKNRG EALDHVLFVG
PPGLGKTTLA QIMAKELGVN FRSTSGPVIA KAGDLAALLT NLEERDVLFI DEIHRLSPAV
EEILYPAMED FQLDLIIGEG PAARSVKIDL SKFTLVAATT RLGLLTTPLR DRFGIPVRLS
FYTVEELELI VRRGARLMGL GMTDDGAREI ARRARGTPRI AGRLLRRVRD FAEVARAPAV
TREIADEALT RLLVDNMGLD QLDTRYLTMI AVNFGGGPVG IETIAAGLSE PRDAIEDIIE
PYMIQQGFIQ RTPRGRVLTA IAWKHLGLMP PKDMEAAQFR LTLEDDD
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