| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3603 |
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| Symbol | |
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| ID | 7388027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2996064 |
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| End bp | 2997080 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652425 |
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| Product | flavin dependant oxidoreductase |
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| Protein accession | YP_002550607 |
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| Protein GI | 222149650 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.141561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCTG GAAAAACCGT GCCGATTTCC ATTCTGGACC TGTCGCCCAT CGCTGAAGGG
CAGAGCGTGT CGGATGCGCT TTCGGCCTCG CGGCGCATGG CCGTTGCGGC TGAAGAGCAT
GGTTATACGC GGTTCTGGCT GGCCGAGCAT CACGGCATGC CGGGCATTGC CAGCGCGGCG
ACCTCTATTG TCATTGCCCA TGTCGGGGCG GCGACCAAGC GGATTCGCAT TGGCTCCGGG
GGCATCATGC TGCCCAATCA TGCGCCTATG GTGATTGCTG AGCAATTCGG CACGCTCGCG
GCGCTGTTTC CGGGCCGGGT CGATCTGGGT CTCGGACGGG CGCCCGGCAC CGATATGCGC
ACAGCCCGCG CCTTGCGCCG CAATATGGAG GCGGGCGTGG ATAACTTCCC CCAGGATATC
CAGGAGCTGC AATTGCTGCT GGGGCCACCG GTTGGCGATG GCAGCCTGAT GGCGGTGCCC
GGTGTGAATA GCGATGTGGC TGTGTGGTTG CTGGGTTCCA GCCTCTATAG CGCCCATCTG
GCGGCAGCGC TGGGTCTTCC CTATGCCTTT GCATCGCATT TTGCCCCCGA TCAACTGTTC
GAGGCGATTT CGATCTACCG CGACCGCTTC CAGCCATCCG AGGCCCTCGA TAAGCCCTAT
ATGATCGTCG GCGTGATGGG CGCGGTCGCC GAGACGGATC AGGAGGCGCG ACGCCTGTTT
ACCTCCGCCC AGCAGCAATT CATCAACCTG CGGCGTAATG TGCGCAGCCA GTTTCCTCGC
CCGGTAGAGA CCATGGAGGG TCTGTGGAGC GAAATGGAGC GCTTTGGCGT CGAGCATACG
CTGCAACATG CTGTGGTCGG CGGCCCGGCG ACAGCGGCTG AAAAGCTATC TCGCTTTCTG
AAAAATACCG GCGCTGATGA AGTGATCGTC TCCATGCCGA TCCACGATAT CGAGGCACGG
TTGACATCGG TCCGGCTGTT TGCCGATCTG CAGCGTCAGG CATGCGAAGC GGCGTGA
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| Protein sequence | MTSGKTVPIS ILDLSPIAEG QSVSDALSAS RRMAVAAEEH GYTRFWLAEH HGMPGIASAA
TSIVIAHVGA ATKRIRIGSG GIMLPNHAPM VIAEQFGTLA ALFPGRVDLG LGRAPGTDMR
TARALRRNME AGVDNFPQDI QELQLLLGPP VGDGSLMAVP GVNSDVAVWL LGSSLYSAHL
AAALGLPYAF ASHFAPDQLF EAISIYRDRF QPSEALDKPY MIVGVMGAVA ETDQEARRLF
TSAQQQFINL RRNVRSQFPR PVETMEGLWS EMERFGVEHT LQHAVVGGPA TAAEKLSRFL
KNTGADEVIV SMPIHDIEAR LTSVRLFADL QRQACEAA
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