| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3596 |
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| Symbol | serC |
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| ID | 7388023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2991899 |
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| End bp | 2993077 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652421 |
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| Product | phosphoserine aminotransferase |
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| Protein accession | YP_002550603 |
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| Protein GI | 222149646 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1932] Phosphoserine aminotransferase |
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| TIGRFAM ID | [TIGR01365] phosphoserine aminotransferase, Methanosarcina type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGATA TTACTGCACC CGCTGTACGT ACGGAAAATG CTAATTTTTC GTCTGGCCCT
TGCTCGAAGC GCCCCGGTTG GGCACTCGAC GCTCTCAGTG ATGCCCCGCT CGGTCGCTCG
CACCGCGCCA AGGTTGGCAA AGACAAGCTG AAGCTGGCCA TTGACCTCAC TCGTGAAATT
CTGAACGTTC CTGCCGATTA CCGCATTGGT ATCGTTCCCG CATCTGACAC CGGCGCTGTT
GAAATGGCGC TGTGGTCCCT GCTGGGTGAA CGCGGCGTGG ACATGCTGTC CTGGGAAAGC
TTCGGCGCTG GCTGGGTGAC CGATGTGGTC AAACAGCTCA AGCTTGCTGA TGTTCGCAAG
TTCAATGCCG ATTACGGCCT GCTGCCAAAC CTTGCCGATG TTGATTTTGA CCGCGACGTG
GTCTTCACAT GGAACGGCAC CACCTCGGGC GTTCGCGTTC CTAACGCCGA TTTCATCCCG
GCTGATCGCA AGGGTCTGAC CATCTGCGAC GCCACGTCGG CTGCCTTTGC GCAAGCGATG
GATTTCTCCA AGCTCGACGT TGTCACCTTC TCCTGGCAGA AGGTTCTGGG CGGCGAGGGC
GGTCACGGCA TGTTGATCCT TAGCCCCCGC GCTGTTGAGC GTCTTCAGAC CTACGCACCG
GCTTGGCCGC TGCCGAAGAT CTTCCGCCTC ACCTCTGGCG GCAAGTTGAT TGAAGGCATC
TTCAAGGGCG AGACCATCAA CACGCCATCG ATGCTTTGCG TTGAAGATTA TCTGGATGCG
CTGAACTGGG CGAAGTCCAT CGGTGGTCTT GAAGCCCTGA TTGCCCGTGC TGATGCCAAT
GCCAAAGTGA TCTTCGATTT CGTGGCTGCC AATGATTGGA TTGCCAACCT TGCACAGGTT
GACGAGACCC GTTCCAACAC ATCTGTCTGC CTGACCATCG CCGATCCAGA GGTTCTGGCG
CTCCCCGCTG AAGAGCAGGC CGCTTTTGCC AAGGGAATTG CAACGCTTCT GGAAAAGCAG
GGCGTGGCCT ATGACATCGG TGCTTACCGC GATGCGCCTG CTGGCCTTCG CATCTGGGCC
GGTGCCACCA TTGAGACCGC CGACATGCAG GCTTTGATGC CTTGGTTGAC CTGGGCTTAC
CAGACCCAGA AGGCGACTCT TGCCAAGGCT GCTGCCTAA
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| Protein sequence | MVDITAPAVR TENANFSSGP CSKRPGWALD ALSDAPLGRS HRAKVGKDKL KLAIDLTREI
LNVPADYRIG IVPASDTGAV EMALWSLLGE RGVDMLSWES FGAGWVTDVV KQLKLADVRK
FNADYGLLPN LADVDFDRDV VFTWNGTTSG VRVPNADFIP ADRKGLTICD ATSAAFAQAM
DFSKLDVVTF SWQKVLGGEG GHGMLILSPR AVERLQTYAP AWPLPKIFRL TSGGKLIEGI
FKGETINTPS MLCVEDYLDA LNWAKSIGGL EALIARADAN AKVIFDFVAA NDWIANLAQV
DETRSNTSVC LTIADPEVLA LPAEEQAAFA KGIATLLEKQ GVAYDIGAYR DAPAGLRIWA
GATIETADMQ ALMPWLTWAY QTQKATLAKA AA
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