Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3593 |
Symbol | |
ID | 7388021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2988593 |
End bp | 2990011 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643652419 |
Product | cytochrome ubiquinol oxidase subunit 1 transmembrane protein |
Protein accession | YP_002550601 |
Protein GI | 222149644 |
COG category | [C] Energy production and conversion |
COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGATC AATTCGATGC CGTTCTTCTC GCGCGAATAC AGTTTGCCTT CACGGTTTCC TTCCACATTA TCTTTCCAGC CTTCTCAATC GGGCTGGCCA GCTATCTGGC CGTGCTGAAC GGCTTGTACC TCTGGACCAA AAAACAGGTC TATGTCGAGC TGTTCAATTT CTGGAAGACG ATCTTTGCCG TCGCCTTCGG CATGGGCGTG GTGTCGGGCA TTGTGATGTC CTATCAGTTC GGCACCAATT GGTCGGTGTT CTCAGATAAG GCCGGGCCGG TGATCGGGCC GCTGATGGGC TATGAGGTGC TGACGGCTTT CTTTCTTGAG GCAGGCTTCC TGGGTGTGAT GCTGTTCGGG CTGCAACGGG TCGGGCCGAA GCTGCATTTC TTCGCCACCT GCATGGTGGC TTTCGGCACC TTGATTTCGG CCACCTGGAT TCTCGCCGTC AATTCCTGGA TGCAGACCCC CGCCGGTTTC GGCATGAACG ATAAAGGCCA GTTCATCCCG CTCGACTGGT GGGCGGTGAT CTTCAATCCG TCCTTCCCCT ATCGGCTGGT GCATATGGTG TTGGCCGCCT ATCTCACCAC GGCGCTTGTG GTGGGGGCGG TGGGTGCCTG GCATCTGCTG CGCAAGACCG CGCCGCGCCG TGCTGGCAAG ATGTTTTCGA TGGCGATGGG CATGGTCGCC GTAGTTGCGC CGATCCAGAT CCTGGCCGGT GATGCCCACG GGCTGAACAC ATTGGAACAT CAGCCAGTGA AAGTCATGGC CATGGAGGGT CATTACGACA GCCATCCCGA TGGCGCGCCG CTCATCCTGT TCGGCATTCC CAATCCCGCC GAAAAACGGG TGGATTATGC CGTCGAGATT CCAAAACTCT CCAGCCTGAT CCTCAAACAC GACCTCAATG CGCCGCTGGC CGGGCTGGAT ACCGTGCCGG ATGAGCTTGA GCCGCCGGTT GCGGTGATTT TCTGGTCGTT CCGCGTCATG GTTGGCCTGG GCTTTGCCAT GCTGGGACTG GGTCTCTGGA GCCTGTGGGC GCGCTATCGC CGCACACTCT ATAGCAATGA CTGGCTGCAC CGCGCCGCTT TTGCCATGGG ACCCGCGGGC TTCATCGCGG TATTGAGCGG CTGGATCACC ACCGAAGTGG GTCGCCAGCC CTACACGATC TACGGTCATT TGCTGACGGC GCAGTCCCAT TCGCCAATTG CCGCGCCTGC GGTGGCGGCC TCGCTGATCG CCTTCATCAT CGTCTATTTT TTCGTGTTCG GGGCGGGCAC CTTCTACATT TTGCGGCTGA TGGCGCGGCT GCCACGCGAT CCGACGCCGG AAATCGGCGA TGCACCACTG CGCAGTACCG GGATCACACC CGGCCCCGCT CACCACACCC ACGGCAAAGG AGGCTCCCAT GCCCTTTGA
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Protein sequence | MFDQFDAVLL ARIQFAFTVS FHIIFPAFSI GLASYLAVLN GLYLWTKKQV YVELFNFWKT IFAVAFGMGV VSGIVMSYQF GTNWSVFSDK AGPVIGPLMG YEVLTAFFLE AGFLGVMLFG LQRVGPKLHF FATCMVAFGT LISATWILAV NSWMQTPAGF GMNDKGQFIP LDWWAVIFNP SFPYRLVHMV LAAYLTTALV VGAVGAWHLL RKTAPRRAGK MFSMAMGMVA VVAPIQILAG DAHGLNTLEH QPVKVMAMEG HYDSHPDGAP LILFGIPNPA EKRVDYAVEI PKLSSLILKH DLNAPLAGLD TVPDELEPPV AVIFWSFRVM VGLGFAMLGL GLWSLWARYR RTLYSNDWLH RAAFAMGPAG FIAVLSGWIT TEVGRQPYTI YGHLLTAQSH SPIAAPAVAA SLIAFIIVYF FVFGAGTFYI LRLMARLPRD PTPEIGDAPL RSTGITPGPA HHTHGKGGSH AL
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